Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2119 and DvMF_2120 are separated by 469 nucleotides DvMF_2120 and DvMF_2121 are separated by 295 nucleotides DvMF_2121 and DvMF_2122 are separated by 345 nucleotides
DvMF_2119: DvMF_2119 - hypothetical protein (RefSeq), at 2,637,174 to 2,637,842
_2119
DvMF_2120: DvMF_2120 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 2,638,312 to 2,638,500
_2120
DvMF_2121: DvMF_2121 - 2-alkenal reductase (RefSeq), at 2,638,796 to 2,640,373
_2121
DvMF_2122: DvMF_2122 - nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (RefSeq), at 2,640,719 to 2,641,798
_2122
Position (kb)
2638
2639
2640
2641 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2637.959 kb on - strand at 2638.145 kb on + strand at 2638.846 kb on + strand at 2638.880 kb on + strand at 2638.981 kb on + strand, within DvMF_2121 at 2638.994 kb on - strand, within DvMF_2121 at 2639.040 kb on + strand, within DvMF_2121 at 2639.046 kb on - strand, within DvMF_2121 at 2639.104 kb on + strand, within DvMF_2121 at 2639.145 kb on - strand, within DvMF_2121 at 2639.237 kb on + strand, within DvMF_2121 at 2639.375 kb on - strand, within DvMF_2121 at 2639.449 kb on - strand, within DvMF_2121 at 2639.533 kb on - strand, within DvMF_2121 at 2639.848 kb on - strand, within DvMF_2121 at 2639.858 kb on - strand, within DvMF_2121 at 2639.907 kb on + strand, within DvMF_2121 at 2640.097 kb on + strand, within DvMF_2121 at 2640.150 kb on - strand, within DvMF_2121 at 2640.188 kb on - strand, within DvMF_2121 at 2640.204 kb on + strand, within DvMF_2121 at 2640.368 kb on + strand at 2640.368 kb on + strand at 2640.381 kb on + strand at 2640.674 kb on + strand at 2640.787 kb on - strand at 2641.300 kb on - strand, within DvMF_2122 at 2641.305 kb on - strand, within DvMF_2122
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,637,959 - -0.7 2,638,145 + +0.3 2,638,846 + -0.9 2,638,880 + -0.4 2,638,981 + DvMF_2121 0.12 -0.2 2,638,994 - DvMF_2121 0.13 -0.2 2,639,040 + DvMF_2121 0.15 -0.1 2,639,046 - DvMF_2121 0.16 -0.3 2,639,104 + DvMF_2121 0.20 +0.2 2,639,145 - DvMF_2121 0.22 -0.8 2,639,237 + DvMF_2121 0.28 -0.3 2,639,375 - DvMF_2121 0.37 +0.6 2,639,449 - DvMF_2121 0.41 -0.0 2,639,533 - DvMF_2121 0.47 -0.3 2,639,848 - DvMF_2121 0.67 -0.3 2,639,858 - DvMF_2121 0.67 -0.1 2,639,907 + DvMF_2121 0.70 +0.0 2,640,097 + DvMF_2121 0.82 -0.1 2,640,150 - DvMF_2121 0.86 -0.4 2,640,188 - DvMF_2121 0.88 -0.4 2,640,204 + DvMF_2121 0.89 +0.5 2,640,368 + -0.2 2,640,368 + +0.2 2,640,381 + -1.1 2,640,674 + +0.2 2,640,787 - -2.8 2,641,300 - DvMF_2122 0.54 -4.8 2,641,305 - DvMF_2122 0.54 -2.9
Or see this region's nucleotide sequence