Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2077 and DvMF_2078 are separated by 301 nucleotides
DvMF_2077: DvMF_2077 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 2,580,554 to 2,582,362
_2077
DvMF_2078: DvMF_2078 - peptidyl-prolyl cis-trans isomerase cyclophilin type (RefSeq), at 2,582,664 to 2,583,170
_2078
Position (kb)
2580
2581
2582
2583 Strain fitness (log2 ratio)
-1
0
1 at 2579.652 kb on + strand at 2579.975 kb on + strand at 2580.016 kb on - strand at 2580.061 kb on - strand at 2580.066 kb on - strand at 2580.351 kb on + strand at 2580.485 kb on + strand at 2580.505 kb on - strand at 2580.654 kb on - strand at 2580.830 kb on + strand, within DvMF_2077 at 2580.831 kb on + strand, within DvMF_2077 at 2581.069 kb on - strand, within DvMF_2077 at 2581.113 kb on - strand, within DvMF_2077 at 2581.148 kb on + strand, within DvMF_2077 at 2581.257 kb on + strand, within DvMF_2077 at 2581.427 kb on - strand, within DvMF_2077 at 2581.466 kb on + strand, within DvMF_2077 at 2581.479 kb on + strand, within DvMF_2077 at 2581.581 kb on - strand, within DvMF_2077 at 2581.607 kb on + strand, within DvMF_2077 at 2581.615 kb on + strand, within DvMF_2077 at 2581.615 kb on - strand, within DvMF_2077 at 2581.716 kb on + strand, within DvMF_2077 at 2581.777 kb on + strand, within DvMF_2077 at 2581.809 kb on + strand, within DvMF_2077 at 2581.861 kb on + strand, within DvMF_2077 at 2581.905 kb on - strand, within DvMF_2077 at 2582.033 kb on - strand, within DvMF_2077 at 2582.383 kb on + strand at 2582.457 kb on - strand at 2582.669 kb on - strand at 2582.741 kb on - strand, within DvMF_2078 at 2583.033 kb on - strand, within DvMF_2078 at 2583.068 kb on - strand, within DvMF_2078 at 2583.134 kb on - strand at 2583.136 kb on + strand at 2583.326 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,579,652 + -0.4 2,579,975 + -0.2 2,580,016 - -0.2 2,580,061 - +0.0 2,580,066 - -0.4 2,580,351 + -0.1 2,580,485 + -0.3 2,580,505 - -0.1 2,580,654 - -0.1 2,580,830 + DvMF_2077 0.15 -0.4 2,580,831 + DvMF_2077 0.15 +0.2 2,581,069 - DvMF_2077 0.28 -0.3 2,581,113 - DvMF_2077 0.31 +0.3 2,581,148 + DvMF_2077 0.33 -0.2 2,581,257 + DvMF_2077 0.39 +0.4 2,581,427 - DvMF_2077 0.48 +0.1 2,581,466 + DvMF_2077 0.50 +1.0 2,581,479 + DvMF_2077 0.51 -0.1 2,581,581 - DvMF_2077 0.57 +0.0 2,581,607 + DvMF_2077 0.58 -0.4 2,581,615 + DvMF_2077 0.59 -0.1 2,581,615 - DvMF_2077 0.59 -0.3 2,581,716 + DvMF_2077 0.64 +0.4 2,581,777 + DvMF_2077 0.68 +0.2 2,581,809 + DvMF_2077 0.69 -0.0 2,581,861 + DvMF_2077 0.72 +0.5 2,581,905 - DvMF_2077 0.75 -0.2 2,582,033 - DvMF_2077 0.82 -0.3 2,582,383 + +0.3 2,582,457 - +0.1 2,582,669 - -0.6 2,582,741 - DvMF_2078 0.15 +0.1 2,583,033 - DvMF_2078 0.73 +0.9 2,583,068 - DvMF_2078 0.80 -0.5 2,583,134 - +0.6 2,583,136 + -0.3 2,583,326 + -0.2
Or see this region's nucleotide sequence