Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1500 and DvMF_1501 are separated by 466 nucleotides DvMF_1501 and DvMF_1502 are separated by 242 nucleotides DvMF_1502 and DvMF_1503 overlap by 4 nucleotides
DvMF_1500: DvMF_1500 - precorrin-2 C20-methyltransferase (RefSeq), at 1,851,059 to 1,851,838
_1500
DvMF_1501: DvMF_1501 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 1,852,305 to 1,854,350
_1501
DvMF_1502: DvMF_1502 - protein of unknown function DUF330 (RefSeq), at 1,854,593 to 1,855,336
_1502
DvMF_1503: DvMF_1503 - Mammalian cell entry related domain protein (RefSeq), at 1,855,333 to 1,856,256
_1503
Position (kb)
1852
1853
1854
1855 Strain fitness (log2 ratio)
-2
-1
0
1 at 1851.452 kb on - strand, within DvMF_1500 at 1851.740 kb on - strand, within DvMF_1500 at 1851.801 kb on - strand at 1851.909 kb on + strand at 1852.068 kb on - strand at 1852.187 kb on + strand at 1852.197 kb on + strand at 1852.270 kb on - strand at 1852.349 kb on - strand at 1853.140 kb on - strand, within DvMF_1501 at 1853.269 kb on - strand, within DvMF_1501 at 1853.633 kb on + strand, within DvMF_1501 at 1853.755 kb on + strand, within DvMF_1501 at 1854.175 kb on - strand at 1854.270 kb on - strand at 1854.279 kb on + strand at 1854.307 kb on - strand at 1854.448 kb on - strand at 1854.552 kb on + strand at 1854.552 kb on + strand at 1854.736 kb on - strand, within DvMF_1502 at 1854.758 kb on - strand, within DvMF_1502 at 1854.803 kb on + strand, within DvMF_1502 at 1855.164 kb on + strand, within DvMF_1502
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,851,452 - DvMF_1500 0.50 -1.3 1,851,740 - DvMF_1500 0.87 -2.3 1,851,801 - +1.0 1,851,909 + -0.5 1,852,068 - -0.8 1,852,187 + -0.6 1,852,197 + -0.2 1,852,270 - -0.4 1,852,349 - -0.5 1,853,140 - DvMF_1501 0.41 -0.1 1,853,269 - DvMF_1501 0.47 -0.3 1,853,633 + DvMF_1501 0.65 -0.4 1,853,755 + DvMF_1501 0.71 +0.2 1,854,175 - -0.3 1,854,270 - +0.3 1,854,279 + -0.0 1,854,307 - +0.3 1,854,448 - -0.3 1,854,552 + -0.1 1,854,552 + -0.6 1,854,736 - DvMF_1502 0.19 -0.5 1,854,758 - DvMF_1502 0.22 -0.4 1,854,803 + DvMF_1502 0.28 -1.0 1,855,164 + DvMF_1502 0.77 -0.4
Or see this region's nucleotide sequence