Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1175 and DvMF_1176 overlap by 4 nucleotides DvMF_1176 and DvMF_1177 overlap by 20 nucleotides DvMF_1177 and DvMF_1178 are separated by 262 nucleotides
DvMF_1175: DvMF_1175 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit (RefSeq), at 1,452,056 to 1,453,480
_1175
DvMF_1176: DvMF_1176 - extracellular solute-binding protein family 3 (RefSeq), at 1,453,477 to 1,454,415
_1176
DvMF_1177: DvMF_1177 - precorrin-4 C11-methyltransferase (RefSeq), at 1,454,396 to 1,455,313
_1177
DvMF_1178: DvMF_1178 - multicopper oxidase type 3 (RefSeq), at 1,455,576 to 1,457,303
_1178
Position (kb)
1454
1455
1456 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1453.682 kb on + strand, within DvMF_1176 at 1453.825 kb on + strand, within DvMF_1176 at 1453.838 kb on + strand, within DvMF_1176 at 1453.862 kb on + strand, within DvMF_1176 at 1453.890 kb on - strand, within DvMF_1176 at 1454.106 kb on - strand, within DvMF_1176 at 1454.148 kb on - strand, within DvMF_1176 at 1454.251 kb on + strand, within DvMF_1176 at 1454.287 kb on - strand, within DvMF_1176 at 1454.388 kb on + strand at 1454.521 kb on - strand, within DvMF_1177 at 1454.591 kb on - strand, within DvMF_1177 at 1454.617 kb on - strand, within DvMF_1177 at 1454.964 kb on + strand, within DvMF_1177 at 1455.271 kb on + strand at 1455.398 kb on - strand at 1455.516 kb on + strand at 1456.297 kb on + strand, within DvMF_1178
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,453,682 + DvMF_1176 0.22 +0.1 1,453,825 + DvMF_1176 0.37 -0.6 1,453,838 + DvMF_1176 0.38 -0.5 1,453,862 + DvMF_1176 0.41 -0.6 1,453,890 - DvMF_1176 0.44 -0.5 1,454,106 - DvMF_1176 0.67 -0.7 1,454,148 - DvMF_1176 0.71 -0.3 1,454,251 + DvMF_1176 0.82 -0.3 1,454,287 - DvMF_1176 0.86 -0.5 1,454,388 + -0.7 1,454,521 - DvMF_1177 0.14 -1.4 1,454,591 - DvMF_1177 0.21 -0.8 1,454,617 - DvMF_1177 0.24 -3.4 1,454,964 + DvMF_1177 0.62 -4.0 1,455,271 + -0.8 1,455,398 - -0.2 1,455,516 + -0.4 1,456,297 + DvMF_1178 0.42 -0.2
Or see this region's nucleotide sequence