Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0787 and DvMF_0788 are separated by 341 nucleotides DvMF_0788 and DvMF_0789 are separated by 278 nucleotides
DvMF_0787: DvMF_0787 - (p)ppGpp synthetase I, SpoT/RelA (RefSeq), at 944,569 to 946,737
_0787
DvMF_0788: DvMF_0788 - extracellular solute-binding protein family 5 (RefSeq), at 947,079 to 948,809
_0788
DvMF_0789: DvMF_0789 - Non-specific serine/threonine protein kinase (RefSeq), at 949,088 to 952,297
_0789
Position (kb)
947
948
949 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 946.399 kb on - strand, within DvMF_0787 at 946.530 kb on + strand at 946.584 kb on + strand at 946.621 kb on - strand at 947.009 kb on + strand at 947.084 kb on - strand at 947.108 kb on - strand at 947.394 kb on - strand, within DvMF_0788 at 947.667 kb on - strand, within DvMF_0788 at 947.832 kb on - strand, within DvMF_0788 at 948.111 kb on + strand, within DvMF_0788 at 948.234 kb on - strand, within DvMF_0788 at 948.250 kb on - strand, within DvMF_0788 at 948.311 kb on - strand, within DvMF_0788 at 948.334 kb on - strand, within DvMF_0788 at 948.409 kb on - strand, within DvMF_0788 at 948.463 kb on + strand, within DvMF_0788 at 948.465 kb on + strand, within DvMF_0788 at 948.767 kb on - strand at 948.767 kb on - strand at 948.829 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 946,399 - DvMF_0787 0.84 -1.7 946,530 + -2.6 946,584 + -3.0 946,621 - -1.9 947,009 + -0.6 947,084 - -0.6 947,108 - -0.5 947,394 - DvMF_0788 0.18 -0.4 947,667 - DvMF_0788 0.34 -0.2 947,832 - DvMF_0788 0.44 -0.1 948,111 + DvMF_0788 0.60 -0.1 948,234 - DvMF_0788 0.67 -0.1 948,250 - DvMF_0788 0.68 -0.3 948,311 - DvMF_0788 0.71 -0.6 948,334 - DvMF_0788 0.73 -0.1 948,409 - DvMF_0788 0.77 -0.7 948,463 + DvMF_0788 0.80 +0.1 948,465 + DvMF_0788 0.80 -0.4 948,767 - -0.3 948,767 - -0.2 948,829 + -0.6
Or see this region's nucleotide sequence