Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0595 and DvMF_0596 overlap by 4 nucleotides DvMF_0596 and DvMF_0597 overlap by 4 nucleotides DvMF_0597 and DvMF_0598 are separated by 260 nucleotides
DvMF_0595: DvMF_0595 - phosphonate ABC transporter, inner membrane subunit (RefSeq), at 706,786 to 707,580
_0595
DvMF_0596: DvMF_0596 - phosphonate ABC transporter, inner membrane subunit (RefSeq), at 707,577 to 708,365
_0596
DvMF_0597: DvMF_0597 - phosphonate ABC transporter, ATPase subunit (RefSeq), at 708,362 to 709,174
_0597
DvMF_0598: DvMF_0598 - phosphonate ABC transporter, periplasmic phosphonate-binding protein (RefSeq), at 709,435 to 710,490
_0598
Position (kb) 708
709
710 Strain fitness (log2 ratio) -1
0
1 at 707.436 kb on + strand, within DvMF_0595 at 707.563 kb on + strand at 707.578 kb on + strand at 707.733 kb on - strand, within DvMF_0596 at 707.895 kb on + strand, within DvMF_0596 at 708.290 kb on - strand at 708.401 kb on - strand at 708.917 kb on - strand, within DvMF_0597 at 708.929 kb on + strand, within DvMF_0597 at 709.020 kb on + strand, within DvMF_0597 at 709.084 kb on - strand, within DvMF_0597 at 709.694 kb on - strand, within DvMF_0598 at 709.874 kb on + strand, within DvMF_0598
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 707,436 + DvMF_0595 0.82 -0.5 707,563 + +0.0 707,578 + +0.1 707,733 - DvMF_0596 0.20 -0.4 707,895 + DvMF_0596 0.40 -0.3 708,290 - +0.4 708,401 - -0.2 708,917 - DvMF_0597 0.68 -0.1 708,929 + DvMF_0597 0.70 +0.5 709,020 + DvMF_0597 0.81 -0.3 709,084 - DvMF_0597 0.89 +0.4 709,694 - DvMF_0598 0.25 -0.2 709,874 + DvMF_0598 0.42 -1.2
Or see this region's nucleotide sequence