Strain Fitness in Marinobacter adhaerens HP15 around HP15_4073

Experiment: L-Glutamic as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4072 and HP15_4073 are separated by 4 nucleotidesHP15_4073 and HP15_4074 are separated by 38 nucleotides HP15_4072: HP15_4072 - diguanylate cyclase with PAS/PAC sensor, at 4,304,969 to 4,307,230 _4072 HP15_4073: HP15_4073 - universal stress protein family protein, at 4,307,235 to 4,307,675 _4073 HP15_4074: HP15_4074 - C4-dicarboxylate transport system (permease large protein), at 4,307,714 to 4,308,985 _4074 Position (kb) 4307 4308Strain fitness (log2 ratio) -1 0 1 2at 4306.271 kb on + strand, within HP15_4072at 4306.271 kb on + strand, within HP15_4072at 4306.279 kb on - strand, within HP15_4072at 4306.279 kb on - strand, within HP15_4072at 4306.279 kb on - strand, within HP15_4072at 4306.281 kb on + strand, within HP15_4072at 4306.294 kb on - strand, within HP15_4072at 4306.456 kb on + strand, within HP15_4072at 4306.464 kb on + strand, within HP15_4072at 4306.472 kb on - strand, within HP15_4072at 4306.658 kb on - strand, within HP15_4072at 4306.674 kb on - strand, within HP15_4072at 4306.697 kb on + strand, within HP15_4072at 4306.712 kb on - strand, within HP15_4072at 4306.806 kb on + strand, within HP15_4072at 4307.018 kb on - strandat 4307.036 kb on + strandat 4307.054 kb on + strandat 4307.105 kb on + strandat 4307.107 kb on + strandat 4307.285 kb on - strand, within HP15_4073at 4307.290 kb on + strand, within HP15_4073at 4307.306 kb on + strand, within HP15_4073at 4307.345 kb on + strand, within HP15_4073at 4307.345 kb on + strand, within HP15_4073at 4307.345 kb on + strand, within HP15_4073at 4307.353 kb on + strand, within HP15_4073at 4307.361 kb on - strand, within HP15_4073at 4307.654 kb on - strandat 4307.684 kb on + strandat 4307.932 kb on - strand, within HP15_4074at 4307.944 kb on - strand, within HP15_4074at 4308.124 kb on - strand, within HP15_4074at 4308.222 kb on + strand, within HP15_4074at 4308.260 kb on - strand, within HP15_4074at 4308.290 kb on + strand, within HP15_4074at 4308.495 kb on - strand, within HP15_4074at 4308.659 kb on - strand, within HP15_4074at 4308.661 kb on + strand, within HP15_4074at 4308.666 kb on + strand, within HP15_4074

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic as (N)
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4,306,271 + HP15_4072 0.58 -0.3
4,306,271 + HP15_4072 0.58 +1.8
4,306,279 - HP15_4072 0.58 -0.0
4,306,279 - HP15_4072 0.58 +1.2
4,306,279 - HP15_4072 0.58 +0.3
4,306,281 + HP15_4072 0.58 -0.1
4,306,294 - HP15_4072 0.59 -0.2
4,306,456 + HP15_4072 0.66 -0.0
4,306,464 + HP15_4072 0.66 -0.9
4,306,472 - HP15_4072 0.66 +1.4
4,306,658 - HP15_4072 0.75 -0.6
4,306,674 - HP15_4072 0.75 +0.2
4,306,697 + HP15_4072 0.76 -1.3
4,306,712 - HP15_4072 0.77 -0.3
4,306,806 + HP15_4072 0.81 -0.8
4,307,018 - +1.0
4,307,036 + +0.0
4,307,054 + -0.3
4,307,105 + -1.0
4,307,107 + +1.0
4,307,285 - HP15_4073 0.11 -0.1
4,307,290 + HP15_4073 0.12 +1.9
4,307,306 + HP15_4073 0.16 -0.9
4,307,345 + HP15_4073 0.25 +0.4
4,307,345 + HP15_4073 0.25 +1.6
4,307,345 + HP15_4073 0.25 +1.9
4,307,353 + HP15_4073 0.27 +1.1
4,307,361 - HP15_4073 0.29 +0.2
4,307,654 - +1.6
4,307,684 + +1.0
4,307,932 - HP15_4074 0.17 -0.5
4,307,944 - HP15_4074 0.18 +1.6
4,308,124 - HP15_4074 0.32 -0.2
4,308,222 + HP15_4074 0.40 +0.4
4,308,260 - HP15_4074 0.43 -0.4
4,308,290 + HP15_4074 0.45 -0.3
4,308,495 - HP15_4074 0.61 -0.3
4,308,659 - HP15_4074 0.74 +0.0
4,308,661 + HP15_4074 0.74 +1.4
4,308,666 + HP15_4074 0.75 -0.6

Or see this region's nucleotide sequence