Experiment: L-Glutamic as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1996 and HP15_1997 overlap by 4 nucleotides HP15_1997 and HP15_1998 overlap by 1 nucleotides HP15_1998 and HP15_1999 overlap by 4 nucleotides HP15_1999 and HP15_2000 are separated by 159 nucleotides
HP15_1996: HP15_1996 - phage Gp37Gp68, at 2,102,446 to 2,103,525
_1996
HP15_1997: HP15_1997 - hypothetical protein, at 2,103,522 to 2,104,019
_1997
HP15_1998: HP15_1998 - conserved hypothetical protein, at 2,104,019 to 2,104,771
_1998
HP15_1999: HP15_1999 - hypothetical protein, at 2,104,768 to 2,105,268
_1999
HP15_2000: HP15_2000 - conserved hypothetical protein, at 2,105,428 to 2,105,706
_2000
Position (kb)
2104
2105 Strain fitness (log2 ratio)
-1
0
1
2 at 2103.022 kb on - strand, within HP15_1996 at 2103.024 kb on - strand, within HP15_1996 at 2103.150 kb on - strand, within HP15_1996 at 2103.244 kb on - strand, within HP15_1996 at 2103.500 kb on - strand at 2103.621 kb on - strand, within HP15_1997 at 2103.832 kb on + strand, within HP15_1997 at 2103.840 kb on - strand, within HP15_1997 at 2103.956 kb on - strand, within HP15_1997 at 2103.977 kb on + strand at 2104.024 kb on - strand at 2104.114 kb on - strand, within HP15_1998 at 2104.117 kb on + strand, within HP15_1998 at 2104.122 kb on + strand, within HP15_1998 at 2104.137 kb on + strand, within HP15_1998 at 2104.145 kb on - strand, within HP15_1998 at 2104.175 kb on - strand, within HP15_1998 at 2104.205 kb on - strand, within HP15_1998 at 2104.245 kb on - strand, within HP15_1998 at 2104.392 kb on + strand, within HP15_1998 at 2104.578 kb on - strand, within HP15_1998 at 2104.609 kb on + strand, within HP15_1998 at 2104.619 kb on - strand, within HP15_1998 at 2104.651 kb on - strand, within HP15_1998 at 2104.854 kb on - strand, within HP15_1999 at 2104.924 kb on - strand, within HP15_1999 at 2104.975 kb on - strand, within HP15_1999 at 2105.051 kb on - strand, within HP15_1999 at 2105.051 kb on - strand, within HP15_1999 at 2105.051 kb on - strand, within HP15_1999 at 2105.051 kb on - strand, within HP15_1999 at 2105.115 kb on - strand, within HP15_1999 at 2105.134 kb on - strand, within HP15_1999 at 2105.277 kb on - strand at 2105.542 kb on - strand, within HP15_2000 at 2105.542 kb on - strand, within HP15_2000 at 2105.634 kb on - strand, within HP15_2000
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic as (N) remove 2,103,022 - HP15_1996 0.53 +0.9 2,103,024 - HP15_1996 0.54 -0.0 2,103,150 - HP15_1996 0.65 +0.0 2,103,244 - HP15_1996 0.74 +0.4 2,103,500 - -0.0 2,103,621 - HP15_1997 0.20 +0.9 2,103,832 + HP15_1997 0.62 +1.4 2,103,840 - HP15_1997 0.64 +1.5 2,103,956 - HP15_1997 0.87 +1.7 2,103,977 + +0.2 2,104,024 - +1.1 2,104,114 - HP15_1998 0.13 -0.3 2,104,117 + HP15_1998 0.13 +1.0 2,104,122 + HP15_1998 0.14 -0.2 2,104,137 + HP15_1998 0.16 +1.3 2,104,145 - HP15_1998 0.17 +1.4 2,104,175 - HP15_1998 0.21 +1.4 2,104,205 - HP15_1998 0.25 -1.5 2,104,245 - HP15_1998 0.30 +1.6 2,104,392 + HP15_1998 0.50 +1.7 2,104,578 - HP15_1998 0.74 -0.2 2,104,609 + HP15_1998 0.78 +2.1 2,104,619 - HP15_1998 0.80 +2.2 2,104,651 - HP15_1998 0.84 -0.7 2,104,854 - HP15_1999 0.17 +1.1 2,104,924 - HP15_1999 0.31 +1.8 2,104,975 - HP15_1999 0.41 -0.6 2,105,051 - HP15_1999 0.56 +0.2 2,105,051 - HP15_1999 0.56 -0.2 2,105,051 - HP15_1999 0.56 -1.2 2,105,051 - HP15_1999 0.56 -1.2 2,105,115 - HP15_1999 0.69 +0.7 2,105,134 - HP15_1999 0.73 -0.7 2,105,277 - +0.2 2,105,542 - HP15_2000 0.41 -0.3 2,105,542 - HP15_2000 0.41 -0.1 2,105,634 - HP15_2000 0.74 -0.2
Or see this region's nucleotide sequence