Experiment: L-Arginine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_554 and HP15_555 are separated by 705 nucleotides HP15_555 and HP15_556 overlap by 4 nucleotides HP15_556 and HP15_557 are separated by 2 nucleotides
HP15_554: HP15_554 - tetrapyrrole methylase family protein, at 573,440 to 574,336
_554
HP15_555: HP15_555 - MraZ protein, at 575,042 to 575,494
_555
HP15_556: HP15_556 - S-adenosyl-L-methionine-dependent methyltransferase mraW, at 575,491 to 576,474
_556
HP15_557: HP15_557 - cell division protein, FtsL-like protein, at 576,477 to 576,881
_557
Position (kb) 575
576 Strain fitness (log2 ratio) -2
-1
0
1
2 at 574.048 kb on - strand, within HP15_554 at 574.082 kb on - strand, within HP15_554 at 574.213 kb on - strand, within HP15_554 at 574.269 kb on + strand at 574.269 kb on + strand at 574.332 kb on + strand at 574.385 kb on - strand at 575.026 kb on + strand at 575.131 kb on + strand, within HP15_555 at 575.237 kb on + strand, within HP15_555 at 575.404 kb on + strand, within HP15_555 at 575.606 kb on + strand, within HP15_556 at 576.303 kb on + strand, within HP15_556 at 576.403 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine as (N) remove 574,048 - HP15_554 0.68 +1.6 574,082 - HP15_554 0.72 +0.1 574,213 - HP15_554 0.86 +2.0 574,269 + -0.2 574,269 + -0.5 574,332 + +2.3 574,385 - -1.0 575,026 + +2.7 575,131 + HP15_555 0.20 +0.2 575,237 + HP15_555 0.43 +1.8 575,404 + HP15_555 0.80 -0.1 575,606 + HP15_556 0.12 -1.0 576,303 + HP15_556 0.83 -1.8 576,403 + +0.3
Or see this region's nucleotide sequence