Strain Fitness in Marinobacter adhaerens HP15 around HP15_3917

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3916 and HP15_3917 are separated by 94 nucleotidesHP15_3917 and HP15_3918 are separated by 123 nucleotides HP15_3916: HP15_3916 - sodium-dependent transporter family protein, at 4,145,750 to 4,147,147 _3916 HP15_3917: HP15_3917 - conserved hypothetical protein, secreted, at 4,147,242 to 4,147,811 _3917 HP15_3918: HP15_3918 - trap-type mannitol/chloroaromatic compound transport system, large permease component, at 4,147,935 to 4,149,245 _3918 Position (kb) 4147 4148Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4146.304 kb on + strand, within HP15_3916at 4146.440 kb on + strand, within HP15_3916at 4146.472 kb on - strand, within HP15_3916at 4146.507 kb on + strand, within HP15_3916at 4146.589 kb on - strand, within HP15_3916at 4146.644 kb on - strand, within HP15_3916at 4146.701 kb on + strand, within HP15_3916at 4146.711 kb on - strand, within HP15_3916at 4146.827 kb on - strand, within HP15_3916at 4146.827 kb on - strand, within HP15_3916at 4146.827 kb on - strand, within HP15_3916at 4146.936 kb on + strand, within HP15_3916at 4146.944 kb on - strand, within HP15_3916at 4147.033 kb on + strandat 4147.077 kb on + strandat 4147.223 kb on + strandat 4147.268 kb on + strandat 4147.354 kb on + strand, within HP15_3917at 4147.359 kb on + strand, within HP15_3917at 4147.367 kb on - strand, within HP15_3917at 4147.378 kb on + strand, within HP15_3917at 4147.425 kb on - strand, within HP15_3917at 4147.435 kb on - strand, within HP15_3917at 4147.538 kb on - strand, within HP15_3917at 4147.554 kb on + strand, within HP15_3917at 4147.554 kb on + strand, within HP15_3917at 4147.562 kb on - strand, within HP15_3917at 4147.562 kb on - strand, within HP15_3917at 4147.580 kb on + strand, within HP15_3917at 4147.680 kb on - strand, within HP15_3917at 4147.743 kb on + strand, within HP15_3917at 4147.743 kb on + strand, within HP15_3917at 4147.743 kb on + strand, within HP15_3917at 4147.743 kb on + strand, within HP15_3917at 4147.757 kb on + strandat 4147.792 kb on + strandat 4147.830 kb on + strandat 4147.838 kb on - strandat 4147.892 kb on + strandat 4148.085 kb on - strand, within HP15_3918at 4148.085 kb on - strand, within HP15_3918at 4148.218 kb on - strand, within HP15_3918at 4148.321 kb on + strand, within HP15_3918at 4148.332 kb on + strand, within HP15_3918at 4148.337 kb on + strand, within HP15_3918at 4148.348 kb on - strand, within HP15_3918at 4148.532 kb on + strand, within HP15_3918at 4148.540 kb on - strand, within HP15_3918at 4148.622 kb on - strand, within HP15_3918at 4148.655 kb on + strand, within HP15_3918

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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4,146,304 + HP15_3916 0.40 -0.7
4,146,440 + HP15_3916 0.49 -0.3
4,146,472 - HP15_3916 0.52 -1.0
4,146,507 + HP15_3916 0.54 -2.2
4,146,589 - HP15_3916 0.60 +1.9
4,146,644 - HP15_3916 0.64 -1.0
4,146,701 + HP15_3916 0.68 +1.5
4,146,711 - HP15_3916 0.69 -2.1
4,146,827 - HP15_3916 0.77 -0.3
4,146,827 - HP15_3916 0.77 -0.2
4,146,827 - HP15_3916 0.77 +1.6
4,146,936 + HP15_3916 0.85 -0.5
4,146,944 - HP15_3916 0.85 -0.4
4,147,033 + +1.4
4,147,077 + -2.0
4,147,223 + +1.2
4,147,268 + -1.2
4,147,354 + HP15_3917 0.20 -0.8
4,147,359 + HP15_3917 0.21 -0.4
4,147,367 - HP15_3917 0.22 -0.6
4,147,378 + HP15_3917 0.24 -0.6
4,147,425 - HP15_3917 0.32 +2.8
4,147,435 - HP15_3917 0.34 +0.2
4,147,538 - HP15_3917 0.52 +0.3
4,147,554 + HP15_3917 0.55 -0.8
4,147,554 + HP15_3917 0.55 -0.7
4,147,562 - HP15_3917 0.56 +1.4
4,147,562 - HP15_3917 0.56 +0.0
4,147,580 + HP15_3917 0.59 -0.3
4,147,680 - HP15_3917 0.77 -0.8
4,147,743 + HP15_3917 0.88 -0.2
4,147,743 + HP15_3917 0.88 +0.0
4,147,743 + HP15_3917 0.88 +0.0
4,147,743 + HP15_3917 0.88 -0.1
4,147,757 + -1.1
4,147,792 + -0.3
4,147,830 + +0.3
4,147,838 - -1.0
4,147,892 + +0.6
4,148,085 - HP15_3918 0.11 -1.0
4,148,085 - HP15_3918 0.11 -0.1
4,148,218 - HP15_3918 0.22 +1.8
4,148,321 + HP15_3918 0.29 -0.4
4,148,332 + HP15_3918 0.30 -1.6
4,148,337 + HP15_3918 0.31 -0.4
4,148,348 - HP15_3918 0.32 +2.1
4,148,532 + HP15_3918 0.46 -0.5
4,148,540 - HP15_3918 0.46 +1.4
4,148,622 - HP15_3918 0.52 +2.2
4,148,655 + HP15_3918 0.55 +0.3

Or see this region's nucleotide sequence