Experiment: L-Arginine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3691 and HP15_3692 are separated by 228 nucleotides HP15_3692 and HP15_3693 are separated by 12 nucleotides
HP15_3691: HP15_3691 - phospholipid/glycerol acyltransferase, at 3,890,521 to 3,891,819
_3691
HP15_3692: HP15_3692 - EAL domain protein, at 3,892,048 to 3,893,313
_3692
HP15_3693: HP15_3693 - multidrug resistance protein, at 3,893,326 to 3,896,472
_3693
Position (kb)
3892
3893
3894 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3891.086 kb on + strand, within HP15_3691 at 3891.120 kb on - strand, within HP15_3691 at 3891.250 kb on + strand, within HP15_3691 at 3891.362 kb on + strand, within HP15_3691 at 3891.367 kb on + strand, within HP15_3691 at 3891.486 kb on + strand, within HP15_3691 at 3891.486 kb on + strand, within HP15_3691 at 3891.599 kb on - strand, within HP15_3691 at 3891.627 kb on + strand, within HP15_3691 at 3891.635 kb on - strand, within HP15_3691 at 3891.754 kb on - strand at 3891.922 kb on + strand at 3891.922 kb on + strand at 3891.930 kb on - strand at 3892.005 kb on + strand at 3892.038 kb on - strand at 3892.038 kb on - strand at 3892.038 kb on - strand at 3892.096 kb on + strand at 3892.192 kb on + strand, within HP15_3692 at 3892.192 kb on - strand, within HP15_3692 at 3892.445 kb on + strand, within HP15_3692 at 3892.455 kb on + strand, within HP15_3692 at 3892.528 kb on - strand, within HP15_3692 at 3892.588 kb on - strand, within HP15_3692 at 3892.662 kb on - strand, within HP15_3692 at 3892.662 kb on - strand, within HP15_3692 at 3892.811 kb on + strand, within HP15_3692 at 3892.819 kb on - strand, within HP15_3692 at 3892.892 kb on - strand, within HP15_3692 at 3892.997 kb on + strand, within HP15_3692 at 3893.016 kb on + strand, within HP15_3692 at 3893.021 kb on + strand, within HP15_3692 at 3893.040 kb on + strand, within HP15_3692 at 3893.116 kb on - strand, within HP15_3692 at 3893.210 kb on + strand at 3893.210 kb on + strand at 3893.218 kb on - strand at 3893.228 kb on - strand at 3893.295 kb on + strand at 3893.367 kb on - strand at 3893.398 kb on + strand at 3893.426 kb on - strand at 3893.475 kb on + strand at 3893.481 kb on + strand at 3893.555 kb on + strand at 3893.599 kb on + strand at 3893.668 kb on - strand, within HP15_3693 at 3893.753 kb on - strand, within HP15_3693 at 3893.800 kb on - strand, within HP15_3693 at 3893.800 kb on - strand, within HP15_3693 at 3893.938 kb on + strand, within HP15_3693 at 3893.995 kb on - strand, within HP15_3693 at 3894.004 kb on + strand, within HP15_3693 at 3894.004 kb on + strand, within HP15_3693 at 3894.012 kb on - strand, within HP15_3693 at 3894.084 kb on + strand, within HP15_3693
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine as (N) remove 3,891,086 + HP15_3691 0.43 +1.1 3,891,120 - HP15_3691 0.46 -2.1 3,891,250 + HP15_3691 0.56 -0.9 3,891,362 + HP15_3691 0.65 -1.0 3,891,367 + HP15_3691 0.65 +2.4 3,891,486 + HP15_3691 0.74 -0.0 3,891,486 + HP15_3691 0.74 +1.4 3,891,599 - HP15_3691 0.83 -0.0 3,891,627 + HP15_3691 0.85 +0.6 3,891,635 - HP15_3691 0.86 -1.2 3,891,754 - -0.2 3,891,922 + +0.1 3,891,922 + +2.3 3,891,930 - +0.2 3,892,005 + +1.3 3,892,038 - -0.8 3,892,038 - -2.0 3,892,038 - -2.2 3,892,096 + -1.1 3,892,192 + HP15_3692 0.11 +0.2 3,892,192 - HP15_3692 0.11 +0.5 3,892,445 + HP15_3692 0.31 -0.1 3,892,455 + HP15_3692 0.32 -1.3 3,892,528 - HP15_3692 0.38 +0.4 3,892,588 - HP15_3692 0.43 -0.9 3,892,662 - HP15_3692 0.48 -0.6 3,892,662 - HP15_3692 0.48 +0.2 3,892,811 + HP15_3692 0.60 -0.3 3,892,819 - HP15_3692 0.61 -1.2 3,892,892 - HP15_3692 0.67 +2.0 3,892,997 + HP15_3692 0.75 -0.5 3,893,016 + HP15_3692 0.76 -1.1 3,893,021 + HP15_3692 0.77 +0.2 3,893,040 + HP15_3692 0.78 -0.7 3,893,116 - HP15_3692 0.84 -0.0 3,893,210 + +2.8 3,893,210 + +2.9 3,893,218 - +0.3 3,893,228 - -1.5 3,893,295 + +1.8 3,893,367 - +0.1 3,893,398 + -1.1 3,893,426 - -1.1 3,893,475 + +1.8 3,893,481 + +1.6 3,893,555 + -0.5 3,893,599 + -0.4 3,893,668 - HP15_3693 0.11 +1.6 3,893,753 - HP15_3693 0.14 -2.0 3,893,800 - HP15_3693 0.15 -0.2 3,893,800 - HP15_3693 0.15 -0.7 3,893,938 + HP15_3693 0.19 -0.1 3,893,995 - HP15_3693 0.21 +2.2 3,894,004 + HP15_3693 0.22 -1.1 3,894,004 + HP15_3693 0.22 -0.3 3,894,012 - HP15_3693 0.22 +1.4 3,894,084 + HP15_3693 0.24 +0.1
Or see this region's nucleotide sequence