Strain Fitness in Marinobacter adhaerens HP15 around HP15_3692

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3691 and HP15_3692 are separated by 228 nucleotidesHP15_3692 and HP15_3693 are separated by 12 nucleotides HP15_3691: HP15_3691 - phospholipid/glycerol acyltransferase, at 3,890,521 to 3,891,819 _3691 HP15_3692: HP15_3692 - EAL domain protein, at 3,892,048 to 3,893,313 _3692 HP15_3693: HP15_3693 - multidrug resistance protein, at 3,893,326 to 3,896,472 _3693 Position (kb) 3892 3893 3894Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3891.086 kb on + strand, within HP15_3691at 3891.120 kb on - strand, within HP15_3691at 3891.250 kb on + strand, within HP15_3691at 3891.362 kb on + strand, within HP15_3691at 3891.367 kb on + strand, within HP15_3691at 3891.486 kb on + strand, within HP15_3691at 3891.486 kb on + strand, within HP15_3691at 3891.599 kb on - strand, within HP15_3691at 3891.627 kb on + strand, within HP15_3691at 3891.635 kb on - strand, within HP15_3691at 3891.754 kb on - strandat 3891.922 kb on + strandat 3891.922 kb on + strandat 3891.930 kb on - strandat 3892.005 kb on + strandat 3892.038 kb on - strandat 3892.038 kb on - strandat 3892.038 kb on - strandat 3892.096 kb on + strandat 3892.192 kb on + strand, within HP15_3692at 3892.192 kb on - strand, within HP15_3692at 3892.445 kb on + strand, within HP15_3692at 3892.455 kb on + strand, within HP15_3692at 3892.528 kb on - strand, within HP15_3692at 3892.588 kb on - strand, within HP15_3692at 3892.662 kb on - strand, within HP15_3692at 3892.662 kb on - strand, within HP15_3692at 3892.811 kb on + strand, within HP15_3692at 3892.819 kb on - strand, within HP15_3692at 3892.892 kb on - strand, within HP15_3692at 3892.997 kb on + strand, within HP15_3692at 3893.016 kb on + strand, within HP15_3692at 3893.021 kb on + strand, within HP15_3692at 3893.040 kb on + strand, within HP15_3692at 3893.116 kb on - strand, within HP15_3692at 3893.210 kb on + strandat 3893.210 kb on + strandat 3893.218 kb on - strandat 3893.228 kb on - strandat 3893.295 kb on + strandat 3893.367 kb on - strandat 3893.398 kb on + strandat 3893.426 kb on - strandat 3893.475 kb on + strandat 3893.481 kb on + strandat 3893.555 kb on + strandat 3893.599 kb on + strandat 3893.668 kb on - strand, within HP15_3693at 3893.753 kb on - strand, within HP15_3693at 3893.800 kb on - strand, within HP15_3693at 3893.800 kb on - strand, within HP15_3693at 3893.938 kb on + strand, within HP15_3693at 3893.995 kb on - strand, within HP15_3693at 3894.004 kb on + strand, within HP15_3693at 3894.004 kb on + strand, within HP15_3693at 3894.012 kb on - strand, within HP15_3693at 3894.084 kb on + strand, within HP15_3693

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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3,891,086 + HP15_3691 0.43 +1.1
3,891,120 - HP15_3691 0.46 -2.1
3,891,250 + HP15_3691 0.56 -0.9
3,891,362 + HP15_3691 0.65 -1.0
3,891,367 + HP15_3691 0.65 +2.4
3,891,486 + HP15_3691 0.74 -0.0
3,891,486 + HP15_3691 0.74 +1.4
3,891,599 - HP15_3691 0.83 -0.0
3,891,627 + HP15_3691 0.85 +0.6
3,891,635 - HP15_3691 0.86 -1.2
3,891,754 - -0.2
3,891,922 + +0.1
3,891,922 + +2.3
3,891,930 - +0.2
3,892,005 + +1.3
3,892,038 - -0.8
3,892,038 - -2.0
3,892,038 - -2.2
3,892,096 + -1.1
3,892,192 + HP15_3692 0.11 +0.2
3,892,192 - HP15_3692 0.11 +0.5
3,892,445 + HP15_3692 0.31 -0.1
3,892,455 + HP15_3692 0.32 -1.3
3,892,528 - HP15_3692 0.38 +0.4
3,892,588 - HP15_3692 0.43 -0.9
3,892,662 - HP15_3692 0.48 -0.6
3,892,662 - HP15_3692 0.48 +0.2
3,892,811 + HP15_3692 0.60 -0.3
3,892,819 - HP15_3692 0.61 -1.2
3,892,892 - HP15_3692 0.67 +2.0
3,892,997 + HP15_3692 0.75 -0.5
3,893,016 + HP15_3692 0.76 -1.1
3,893,021 + HP15_3692 0.77 +0.2
3,893,040 + HP15_3692 0.78 -0.7
3,893,116 - HP15_3692 0.84 -0.0
3,893,210 + +2.8
3,893,210 + +2.9
3,893,218 - +0.3
3,893,228 - -1.5
3,893,295 + +1.8
3,893,367 - +0.1
3,893,398 + -1.1
3,893,426 - -1.1
3,893,475 + +1.8
3,893,481 + +1.6
3,893,555 + -0.5
3,893,599 + -0.4
3,893,668 - HP15_3693 0.11 +1.6
3,893,753 - HP15_3693 0.14 -2.0
3,893,800 - HP15_3693 0.15 -0.2
3,893,800 - HP15_3693 0.15 -0.7
3,893,938 + HP15_3693 0.19 -0.1
3,893,995 - HP15_3693 0.21 +2.2
3,894,004 + HP15_3693 0.22 -1.1
3,894,004 + HP15_3693 0.22 -0.3
3,894,012 - HP15_3693 0.22 +1.4
3,894,084 + HP15_3693 0.24 +0.1

Or see this region's nucleotide sequence