Strain Fitness in Marinobacter adhaerens HP15 around HP15_3570

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3569 and HP15_3570 are separated by 44 nucleotidesHP15_3570 and HP15_3571 overlap by 8 nucleotidesHP15_3571 and HP15_3572 overlap by 7 nucleotides HP15_3569: HP15_3569 - succinylglutamate desuccinylase/aspartoacylase, at 3,760,426 to 3,761,817 _3569 HP15_3570: HP15_3570 - membrane protein containing DUF6, transmembrane, at 3,761,862 to 3,762,830 _3570 HP15_3571: HP15_3571 - carbohydrate-binding family V/XII, at 3,762,823 to 3,763,368 _3571 HP15_3572: HP15_3572 - aminotransferase, classes I and II, at 3,763,362 to 3,764,567 _3572 Position (kb) 3761 3762 3763Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3760.872 kb on - strand, within HP15_3569at 3760.873 kb on - strand, within HP15_3569at 3760.909 kb on + strand, within HP15_3569at 3760.922 kb on - strand, within HP15_3569at 3760.947 kb on + strand, within HP15_3569at 3760.947 kb on + strand, within HP15_3569at 3760.955 kb on - strand, within HP15_3569at 3760.991 kb on + strand, within HP15_3569at 3760.999 kb on - strand, within HP15_3569at 3761.005 kb on - strand, within HP15_3569at 3761.041 kb on + strand, within HP15_3569at 3761.093 kb on - strand, within HP15_3569at 3761.330 kb on + strand, within HP15_3569at 3761.365 kb on - strand, within HP15_3569at 3761.487 kb on - strand, within HP15_3569at 3761.502 kb on - strand, within HP15_3569at 3761.511 kb on - strand, within HP15_3569at 3761.593 kb on + strand, within HP15_3569at 3761.688 kb on + strandat 3761.744 kb on + strandat 3761.849 kb on - strandat 3761.854 kb on - strandat 3761.854 kb on - strandat 3761.856 kb on + strandat 3761.906 kb on + strandat 3761.906 kb on + strandat 3762.003 kb on + strand, within HP15_3570at 3762.021 kb on - strand, within HP15_3570at 3762.131 kb on + strand, within HP15_3570at 3762.139 kb on - strand, within HP15_3570at 3762.178 kb on + strand, within HP15_3570at 3762.183 kb on + strand, within HP15_3570at 3762.191 kb on - strand, within HP15_3570at 3762.191 kb on - strand, within HP15_3570at 3762.335 kb on - strand, within HP15_3570at 3762.378 kb on + strand, within HP15_3570at 3762.378 kb on + strand, within HP15_3570at 3762.590 kb on - strand, within HP15_3570at 3762.627 kb on - strand, within HP15_3570at 3762.629 kb on + strand, within HP15_3570at 3762.661 kb on - strand, within HP15_3570at 3762.777 kb on + strandat 3762.934 kb on + strand, within HP15_3571at 3762.939 kb on + strand, within HP15_3571at 3762.954 kb on + strand, within HP15_3571at 3762.962 kb on - strand, within HP15_3571at 3763.145 kb on - strand, within HP15_3571at 3763.148 kb on + strand, within HP15_3571at 3763.158 kb on + strand, within HP15_3571at 3763.186 kb on + strand, within HP15_3571at 3763.261 kb on + strand, within HP15_3571at 3763.274 kb on - strand, within HP15_3571at 3763.289 kb on + strand, within HP15_3571at 3763.352 kb on - strandat 3763.352 kb on - strandat 3763.354 kb on + strandat 3763.391 kb on - strandat 3763.391 kb on - strandat 3763.472 kb on - strandat 3763.474 kb on + strandat 3763.542 kb on + strand, within HP15_3572at 3763.580 kb on - strand, within HP15_3572at 3763.733 kb on + strand, within HP15_3572at 3763.741 kb on - strand, within HP15_3572at 3763.808 kb on + strand, within HP15_3572at 3763.817 kb on + strand, within HP15_3572

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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3,760,872 - HP15_3569 0.32 +0.2
3,760,873 - HP15_3569 0.32 -0.1
3,760,909 + HP15_3569 0.35 +2.1
3,760,922 - HP15_3569 0.36 +1.9
3,760,947 + HP15_3569 0.37 +2.4
3,760,947 + HP15_3569 0.37 -0.7
3,760,955 - HP15_3569 0.38 +1.5
3,760,991 + HP15_3569 0.41 +2.3
3,760,999 - HP15_3569 0.41 -0.7
3,761,005 - HP15_3569 0.42 -0.0
3,761,041 + HP15_3569 0.44 +2.3
3,761,093 - HP15_3569 0.48 +2.2
3,761,330 + HP15_3569 0.65 -0.6
3,761,365 - HP15_3569 0.67 +0.2
3,761,487 - HP15_3569 0.76 +1.9
3,761,502 - HP15_3569 0.77 +1.4
3,761,511 - HP15_3569 0.78 +2.6
3,761,593 + HP15_3569 0.84 -0.5
3,761,688 + +1.8
3,761,744 + -0.2
3,761,849 - +0.1
3,761,854 - +2.2
3,761,854 - -2.0
3,761,856 + +1.4
3,761,906 + -0.7
3,761,906 + +1.4
3,762,003 + HP15_3570 0.15 -1.8
3,762,021 - HP15_3570 0.16 -0.8
3,762,131 + HP15_3570 0.28 -0.1
3,762,139 - HP15_3570 0.29 -2.2
3,762,178 + HP15_3570 0.33 -0.4
3,762,183 + HP15_3570 0.33 -0.3
3,762,191 - HP15_3570 0.34 +0.4
3,762,191 - HP15_3570 0.34 -0.6
3,762,335 - HP15_3570 0.49 -0.4
3,762,378 + HP15_3570 0.53 -0.7
3,762,378 + HP15_3570 0.53 -0.8
3,762,590 - HP15_3570 0.75 +1.9
3,762,627 - HP15_3570 0.79 +4.0
3,762,629 + HP15_3570 0.79 -1.7
3,762,661 - HP15_3570 0.82 -1.7
3,762,777 + +0.2
3,762,934 + HP15_3571 0.20 +1.1
3,762,939 + HP15_3571 0.21 +2.0
3,762,954 + HP15_3571 0.24 +1.8
3,762,962 - HP15_3571 0.25 +2.3
3,763,145 - HP15_3571 0.59 +0.7
3,763,148 + HP15_3571 0.60 -2.2
3,763,158 + HP15_3571 0.61 -1.9
3,763,186 + HP15_3571 0.66 -0.8
3,763,261 + HP15_3571 0.80 +1.9
3,763,274 - HP15_3571 0.83 +0.1
3,763,289 + HP15_3571 0.85 +2.0
3,763,352 - +1.0
3,763,352 - -0.4
3,763,354 + -0.4
3,763,391 - -0.2
3,763,391 - +1.6
3,763,472 - +0.1
3,763,474 + +2.2
3,763,542 + HP15_3572 0.15 +0.1
3,763,580 - HP15_3572 0.18 +0.2
3,763,733 + HP15_3572 0.31 -2.1
3,763,741 - HP15_3572 0.31 +1.1
3,763,808 + HP15_3572 0.37 +0.3
3,763,817 + HP15_3572 0.38 -0.7

Or see this region's nucleotide sequence