Strain Fitness in Marinobacter adhaerens HP15 around HP15_3316

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3315 and HP15_3316 are separated by 26 nucleotidesHP15_3316 and HP15_3317 are separated by 24 nucleotidesHP15_3317 and HP15_3318 are separated by 57 nucleotides HP15_3315: HP15_3315 - acetylornithine deacetylase (ArgE), at 3,475,211 to 3,476,380 _3315 HP15_3316: HP15_3316 - acetylornithine deacetylase, at 3,476,407 to 3,477,657 _3316 HP15_3317: HP15_3317 - acetylglutamate kinase, at 3,477,682 to 3,478,578 _3317 HP15_3318: HP15_3318 - phosphomannomutase, at 3,478,636 to 3,481,278 _3318 Position (kb) 3476 3477 3478Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3475.416 kb on + strand, within HP15_3315at 3475.416 kb on + strand, within HP15_3315at 3475.416 kb on + strand, within HP15_3315at 3475.424 kb on - strand, within HP15_3315at 3475.451 kb on - strand, within HP15_3315at 3475.463 kb on + strand, within HP15_3315at 3475.492 kb on + strand, within HP15_3315at 3475.521 kb on - strand, within HP15_3315at 3475.583 kb on - strand, within HP15_3315at 3475.604 kb on + strand, within HP15_3315at 3475.648 kb on + strand, within HP15_3315at 3475.765 kb on - strand, within HP15_3315at 3475.878 kb on + strand, within HP15_3315at 3475.886 kb on - strand, within HP15_3315at 3475.915 kb on + strand, within HP15_3315at 3475.953 kb on + strand, within HP15_3315at 3476.079 kb on - strand, within HP15_3315at 3476.079 kb on - strand, within HP15_3315at 3476.192 kb on + strand, within HP15_3315at 3476.249 kb on + strand, within HP15_3315at 3476.255 kb on + strand, within HP15_3315at 3476.306 kb on + strandat 3476.455 kb on + strandat 3476.455 kb on + strandat 3476.465 kb on + strandat 3476.670 kb on + strand, within HP15_3316at 3476.670 kb on + strand, within HP15_3316at 3476.678 kb on - strand, within HP15_3316at 3476.678 kb on - strand, within HP15_3316at 3476.724 kb on + strand, within HP15_3316at 3476.845 kb on - strand, within HP15_3316at 3477.086 kb on + strand, within HP15_3316at 3477.086 kb on + strand, within HP15_3316at 3477.104 kb on - strand, within HP15_3316at 3477.112 kb on + strand, within HP15_3316at 3477.123 kb on - strand, within HP15_3316at 3477.204 kb on - strand, within HP15_3316at 3477.204 kb on - strand, within HP15_3316at 3477.236 kb on - strand, within HP15_3316at 3477.323 kb on - strand, within HP15_3316at 3477.323 kb on - strand, within HP15_3316at 3477.327 kb on + strand, within HP15_3316at 3477.327 kb on + strand, within HP15_3316at 3477.327 kb on + strand, within HP15_3316at 3477.327 kb on + strand, within HP15_3316at 3477.327 kb on + strand, within HP15_3316at 3477.327 kb on + strand, within HP15_3316at 3477.335 kb on - strand, within HP15_3316at 3477.335 kb on - strand, within HP15_3316at 3477.350 kb on + strand, within HP15_3316at 3477.399 kb on + strand, within HP15_3316at 3477.506 kb on + strand, within HP15_3316at 3477.523 kb on + strand, within HP15_3316at 3477.523 kb on + strand, within HP15_3316at 3477.531 kb on - strand, within HP15_3316at 3477.531 kb on - strand, within HP15_3316at 3477.531 kb on - strand, within HP15_3316at 3477.531 kb on - strand, within HP15_3316at 3477.531 kb on - strand, within HP15_3316at 3477.584 kb on + strandat 3477.634 kb on - strandat 3477.796 kb on + strand, within HP15_3317at 3478.281 kb on - strand, within HP15_3317at 3478.567 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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3,475,416 + HP15_3315 0.18 +1.8
3,475,416 + HP15_3315 0.18 +2.2
3,475,416 + HP15_3315 0.18 -1.5
3,475,424 - HP15_3315 0.18 +0.3
3,475,451 - HP15_3315 0.21 +0.1
3,475,463 + HP15_3315 0.22 -3.4
3,475,492 + HP15_3315 0.24 -0.3
3,475,521 - HP15_3315 0.26 +1.8
3,475,583 - HP15_3315 0.32 -1.5
3,475,604 + HP15_3315 0.34 +0.4
3,475,648 + HP15_3315 0.37 -1.1
3,475,765 - HP15_3315 0.47 -0.0
3,475,878 + HP15_3315 0.57 -1.0
3,475,886 - HP15_3315 0.58 -0.1
3,475,915 + HP15_3315 0.60 +1.9
3,475,953 + HP15_3315 0.63 -0.9
3,476,079 - HP15_3315 0.74 -2.2
3,476,079 - HP15_3315 0.74 -1.1
3,476,192 + HP15_3315 0.84 -1.8
3,476,249 + HP15_3315 0.89 +2.4
3,476,255 + HP15_3315 0.89 -0.6
3,476,306 + -0.7
3,476,455 + +0.2
3,476,455 + +2.2
3,476,465 + -0.1
3,476,670 + HP15_3316 0.21 +0.3
3,476,670 + HP15_3316 0.21 -1.5
3,476,678 - HP15_3316 0.22 +1.2
3,476,678 - HP15_3316 0.22 +3.0
3,476,724 + HP15_3316 0.25 +3.3
3,476,845 - HP15_3316 0.35 -0.6
3,477,086 + HP15_3316 0.54 +2.3
3,477,086 + HP15_3316 0.54 +2.2
3,477,104 - HP15_3316 0.56 -0.0
3,477,112 + HP15_3316 0.56 +2.8
3,477,123 - HP15_3316 0.57 -0.4
3,477,204 - HP15_3316 0.64 -0.7
3,477,204 - HP15_3316 0.64 +0.2
3,477,236 - HP15_3316 0.66 +0.2
3,477,323 - HP15_3316 0.73 +1.9
3,477,323 - HP15_3316 0.73 +1.3
3,477,327 + HP15_3316 0.74 +2.7
3,477,327 + HP15_3316 0.74 +1.2
3,477,327 + HP15_3316 0.74 +0.9
3,477,327 + HP15_3316 0.74 -0.8
3,477,327 + HP15_3316 0.74 +0.7
3,477,327 + HP15_3316 0.74 +2.0
3,477,335 - HP15_3316 0.74 -1.5
3,477,335 - HP15_3316 0.74 +2.2
3,477,350 + HP15_3316 0.75 +2.3
3,477,399 + HP15_3316 0.79 -0.2
3,477,506 + HP15_3316 0.88 +2.4
3,477,523 + HP15_3316 0.89 -0.3
3,477,523 + HP15_3316 0.89 +0.6
3,477,531 - HP15_3316 0.90 -0.4
3,477,531 - HP15_3316 0.90 -0.1
3,477,531 - HP15_3316 0.90 +2.4
3,477,531 - HP15_3316 0.90 +0.3
3,477,531 - HP15_3316 0.90 +2.3
3,477,584 + -0.3
3,477,634 - -0.2
3,477,796 + HP15_3317 0.13 +0.2
3,478,281 - HP15_3317 0.67 +0.6
3,478,567 + -1.1

Or see this region's nucleotide sequence