Strain Fitness in Marinobacter adhaerens HP15 around HP15_2900

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2899 and HP15_2900 are separated by 132 nucleotidesHP15_2900 and HP15_2901 are separated by 126 nucleotides HP15_2899: HP15_2899 - rhodanese sulfurtransferase, at 3,035,584 to 3,036,606 _2899 HP15_2900: HP15_2900 - DSBA oxidoreductase, at 3,036,739 to 3,037,470 _2900 HP15_2901: HP15_2901 - 2-nitropropane dioxygenase NPD, at 3,037,597 to 3,038,571 _2901 Position (kb) 3036 3037 3038Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3035.814 kb on + strand, within HP15_2899at 3035.872 kb on - strand, within HP15_2899at 3036.001 kb on + strand, within HP15_2899at 3036.001 kb on - strand, within HP15_2899at 3036.020 kb on - strand, within HP15_2899at 3036.027 kb on - strand, within HP15_2899at 3036.068 kb on + strand, within HP15_2899at 3036.086 kb on + strand, within HP15_2899at 3036.110 kb on - strand, within HP15_2899at 3036.135 kb on + strand, within HP15_2899at 3036.282 kb on + strand, within HP15_2899at 3036.293 kb on + strand, within HP15_2899at 3036.306 kb on - strand, within HP15_2899at 3036.568 kb on + strandat 3036.568 kb on + strandat 3036.568 kb on + strandat 3036.576 kb on - strandat 3036.643 kb on + strandat 3036.727 kb on + strandat 3036.884 kb on + strand, within HP15_2900at 3037.139 kb on + strand, within HP15_2900at 3037.159 kb on - strand, within HP15_2900at 3037.561 kb on - strandat 3037.756 kb on - strand, within HP15_2901at 3037.853 kb on + strand, within HP15_2901at 3037.885 kb on - strand, within HP15_2901at 3038.124 kb on - strand, within HP15_2901at 3038.146 kb on + strand, within HP15_2901at 3038.154 kb on - strand, within HP15_2901at 3038.159 kb on - strand, within HP15_2901at 3038.184 kb on - strand, within HP15_2901at 3038.202 kb on - strand, within HP15_2901at 3038.276 kb on - strand, within HP15_2901at 3038.276 kb on - strand, within HP15_2901at 3038.344 kb on - strand, within HP15_2901at 3038.380 kb on - strand, within HP15_2901

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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3,035,814 + HP15_2899 0.22 -0.2
3,035,872 - HP15_2899 0.28 +0.6
3,036,001 + HP15_2899 0.41 -2.7
3,036,001 - HP15_2899 0.41 +2.1
3,036,020 - HP15_2899 0.43 +0.1
3,036,027 - HP15_2899 0.43 -0.5
3,036,068 + HP15_2899 0.47 +2.9
3,036,086 + HP15_2899 0.49 -0.0
3,036,110 - HP15_2899 0.51 -0.5
3,036,135 + HP15_2899 0.54 +1.0
3,036,282 + HP15_2899 0.68 +2.0
3,036,293 + HP15_2899 0.69 +2.1
3,036,306 - HP15_2899 0.71 +1.1
3,036,568 + -1.1
3,036,568 + -0.4
3,036,568 + -0.2
3,036,576 - +2.4
3,036,643 + -0.1
3,036,727 + +1.3
3,036,884 + HP15_2900 0.20 -0.1
3,037,139 + HP15_2900 0.55 -2.6
3,037,159 - HP15_2900 0.57 -1.3
3,037,561 - +0.1
3,037,756 - HP15_2901 0.16 -0.7
3,037,853 + HP15_2901 0.26 +1.8
3,037,885 - HP15_2901 0.30 -0.7
3,038,124 - HP15_2901 0.54 -1.9
3,038,146 + HP15_2901 0.56 -1.1
3,038,154 - HP15_2901 0.57 +1.1
3,038,159 - HP15_2901 0.58 +0.5
3,038,184 - HP15_2901 0.60 +2.1
3,038,202 - HP15_2901 0.62 +2.1
3,038,276 - HP15_2901 0.70 +0.4
3,038,276 - HP15_2901 0.70 +0.5
3,038,344 - HP15_2901 0.77 -0.4
3,038,380 - HP15_2901 0.80 +0.3

Or see this region's nucleotide sequence