Strain Fitness in Marinobacter adhaerens HP15 around HP15_2480

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2479 and HP15_2480 are separated by 197 nucleotidesHP15_2480 and HP15_2481 are separated by 22 nucleotidesHP15_2481 and HP15_2482 are separated by 51 nucleotides HP15_2479: HP15_2479 - acyl-CoA dehydrogenase family protein, at 2,619,999 to 2,621,870 _2479 HP15_2480: HP15_2480 - conserved hypothetical protein, at 2,622,068 to 2,622,736 _2480 HP15_2481: HP15_2481 - protein of unknown function domain protein, at 2,622,759 to 2,623,004 _2481 HP15_2482: HP15_2482 - dethiobiotin synthetase, at 2,623,056 to 2,623,748 _2482 Position (kb) 2622 2623Strain fitness (log2 ratio) -2 -1 0 1 2at 2621.103 kb on - strand, within HP15_2479at 2621.175 kb on + strand, within HP15_2479at 2621.182 kb on + strand, within HP15_2479at 2621.183 kb on - strand, within HP15_2479at 2621.206 kb on + strand, within HP15_2479at 2621.257 kb on + strand, within HP15_2479at 2621.337 kb on - strand, within HP15_2479at 2621.337 kb on - strand, within HP15_2479at 2621.381 kb on + strand, within HP15_2479at 2621.406 kb on + strand, within HP15_2479at 2621.414 kb on - strand, within HP15_2479at 2621.478 kb on + strand, within HP15_2479at 2621.494 kb on - strand, within HP15_2479at 2621.505 kb on - strand, within HP15_2479at 2621.722 kb on + strandat 2621.722 kb on + strandat 2621.730 kb on - strandat 2621.782 kb on + strandat 2621.782 kb on + strandat 2621.802 kb on - strandat 2621.852 kb on - strandat 2621.852 kb on - strandat 2621.979 kb on - strandat 2622.000 kb on + strandat 2622.079 kb on - strandat 2622.079 kb on - strandat 2622.126 kb on - strandat 2622.134 kb on + strandat 2622.196 kb on + strand, within HP15_2480at 2622.196 kb on + strand, within HP15_2480at 2622.204 kb on - strand, within HP15_2480at 2622.334 kb on - strand, within HP15_2480at 2622.343 kb on + strand, within HP15_2480at 2622.466 kb on - strand, within HP15_2480at 2622.506 kb on + strand, within HP15_2480at 2622.521 kb on + strand, within HP15_2480at 2622.706 kb on + strandat 2623.052 kb on - strandat 2623.141 kb on - strand, within HP15_2482at 2623.191 kb on + strand, within HP15_2482at 2623.272 kb on - strand, within HP15_2482at 2623.272 kb on - strand, within HP15_2482at 2623.393 kb on + strand, within HP15_2482at 2623.459 kb on + strand, within HP15_2482at 2623.467 kb on - strand, within HP15_2482at 2623.475 kb on - strand, within HP15_2482at 2623.563 kb on - strand, within HP15_2482at 2623.571 kb on + strand, within HP15_2482at 2623.579 kb on - strand, within HP15_2482at 2623.579 kb on - strand, within HP15_2482at 2623.662 kb on - strand, within HP15_2482

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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2,621,103 - HP15_2479 0.59 -0.3
2,621,175 + HP15_2479 0.63 -1.4
2,621,182 + HP15_2479 0.63 -0.9
2,621,183 - HP15_2479 0.63 +1.6
2,621,206 + HP15_2479 0.64 +2.2
2,621,257 + HP15_2479 0.67 -0.9
2,621,337 - HP15_2479 0.71 -1.0
2,621,337 - HP15_2479 0.71 +2.1
2,621,381 + HP15_2479 0.74 -0.0
2,621,406 + HP15_2479 0.75 +2.0
2,621,414 - HP15_2479 0.76 -2.1
2,621,478 + HP15_2479 0.79 -0.7
2,621,494 - HP15_2479 0.80 +0.4
2,621,505 - HP15_2479 0.80 +0.5
2,621,722 + +1.8
2,621,722 + +1.1
2,621,730 - -2.3
2,621,782 + +0.4
2,621,782 + +1.9
2,621,802 - +1.6
2,621,852 - +1.8
2,621,852 - -2.3
2,621,979 - -0.3
2,622,000 + +2.1
2,622,079 - -1.8
2,622,079 - -1.8
2,622,126 - -1.2
2,622,134 + +0.1
2,622,196 + HP15_2480 0.19 -0.6
2,622,196 + HP15_2480 0.19 +1.2
2,622,204 - HP15_2480 0.20 -0.8
2,622,334 - HP15_2480 0.40 +0.1
2,622,343 + HP15_2480 0.41 -0.6
2,622,466 - HP15_2480 0.59 +0.6
2,622,506 + HP15_2480 0.65 +1.6
2,622,521 + HP15_2480 0.68 -1.0
2,622,706 + +1.4
2,623,052 - +0.0
2,623,141 - HP15_2482 0.12 -0.8
2,623,191 + HP15_2482 0.19 +1.5
2,623,272 - HP15_2482 0.31 +1.4
2,623,272 - HP15_2482 0.31 -0.2
2,623,393 + HP15_2482 0.49 -1.1
2,623,459 + HP15_2482 0.58 -0.7
2,623,467 - HP15_2482 0.59 +0.6
2,623,475 - HP15_2482 0.60 +2.2
2,623,563 - HP15_2482 0.73 -2.2
2,623,571 + HP15_2482 0.74 -0.6
2,623,579 - HP15_2482 0.75 -0.1
2,623,579 - HP15_2482 0.75 -0.3
2,623,662 - HP15_2482 0.87 -0.7

Or see this region's nucleotide sequence