Strain Fitness in Marinobacter adhaerens HP15 around HP15_2360

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2358 and HP15_2359 are separated by 123 nucleotidesHP15_2359 and HP15_2360 are separated by 227 nucleotidesHP15_2360 and HP15_2361 are separated by 282 nucleotides HP15_2358: HP15_2358 - chaperonin GroEL, at 2,483,931 to 2,485,538 _2358 HP15_2359: HP15_2359 - chaperonin Cpn10, at 2,485,662 to 2,485,916 _2359 HP15_2360: HP15_2360 - FxsA cytoplasmic membrane protein, at 2,486,144 to 2,486,692 _2360 HP15_2361: HP15_2361 - 3-oxoacyl-(acyl carrier protein) reductase, at 2,486,975 to 2,487,736 _2361 Position (kb) 2486 2487Strain fitness (log2 ratio) -2 -1 0 1 2at 2486.217 kb on - strand, within HP15_2360at 2486.330 kb on + strand, within HP15_2360at 2486.330 kb on + strand, within HP15_2360at 2486.338 kb on - strand, within HP15_2360at 2486.601 kb on + strand, within HP15_2360at 2486.705 kb on + strandat 2486.871 kb on - strandat 2486.927 kb on - strandat 2487.015 kb on + strandat 2487.046 kb on - strandat 2487.046 kb on - strandat 2487.046 kb on - strandat 2487.046 kb on - strandat 2487.052 kb on + strand, within HP15_2361at 2487.053 kb on - strand, within HP15_2361at 2487.076 kb on + strand, within HP15_2361at 2487.220 kb on + strand, within HP15_2361at 2487.273 kb on + strand, within HP15_2361at 2487.298 kb on - strand, within HP15_2361at 2487.313 kb on - strandat 2487.333 kb on + strand, within HP15_2361at 2487.341 kb on - strand, within HP15_2361at 2487.470 kb on + strand, within HP15_2361at 2487.482 kb on + strand, within HP15_2361at 2487.494 kb on + strand, within HP15_2361at 2487.507 kb on - strand, within HP15_2361at 2487.631 kb on + strand, within HP15_2361

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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2,486,217 - HP15_2360 0.13 -1.8
2,486,330 + HP15_2360 0.34 +1.7
2,486,330 + HP15_2360 0.34 +1.3
2,486,338 - HP15_2360 0.35 +0.1
2,486,601 + HP15_2360 0.83 -0.5
2,486,705 + +1.6
2,486,871 - +0.3
2,486,927 - -0.7
2,487,015 + +0.1
2,487,046 - -0.1
2,487,046 - -1.4
2,487,046 - -1.2
2,487,046 - -0.1
2,487,052 + HP15_2361 0.10 +1.9
2,487,053 - HP15_2361 0.10 -1.2
2,487,076 + HP15_2361 0.13 -1.9
2,487,220 + HP15_2361 0.32 +1.7
2,487,273 + HP15_2361 0.39 -0.1
2,487,298 - HP15_2361 0.42 +0.3
2,487,313 - +0.7
2,487,333 + HP15_2361 0.47 -1.1
2,487,341 - HP15_2361 0.48 +1.9
2,487,470 + HP15_2361 0.65 -1.4
2,487,482 + HP15_2361 0.67 +1.2
2,487,494 + HP15_2361 0.68 +1.4
2,487,507 - HP15_2361 0.70 -1.0
2,487,631 + HP15_2361 0.86 -1.1

Or see this region's nucleotide sequence