Strain Fitness in Marinobacter adhaerens HP15 around HP15_2313

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2311 and HP15_2312 are separated by 8 nucleotidesHP15_2312 and HP15_2313 are separated by 4 nucleotidesHP15_2313 and HP15_2314 are separated by 1 nucleotidesHP15_2314 and HP15_2315 overlap by 8 nucleotides HP15_2311: HP15_2311 - flagellar biosynthetic protein FliQ, at 2,433,530 to 2,433,799 _2311 HP15_2312: HP15_2312 - flagellar biosynthesis protein FliP, at 2,433,808 to 2,434,584 _2312 HP15_2313: HP15_2313 - flagellar biosynthesis protein, FliO, at 2,434,589 to 2,435,038 _2313 HP15_2314: HP15_2314 - flagellar motor switch protein FliN-like protein, at 2,435,040 to 2,435,531 _2314 HP15_2315: HP15_2315 - flagellar motor switch protein FliM-like protein, at 2,435,524 to 2,436,522 _2315 Position (kb) 2434 2435 2436Strain fitness (log2 ratio) -1 0 1 2 3at 2433.658 kb on - strand, within HP15_2311at 2433.690 kb on + strand, within HP15_2311at 2433.690 kb on + strand, within HP15_2311at 2433.697 kb on + strand, within HP15_2311at 2433.723 kb on - strand, within HP15_2311at 2433.758 kb on - strand, within HP15_2311at 2433.831 kb on - strandat 2433.896 kb on - strand, within HP15_2312at 2433.925 kb on - strand, within HP15_2312at 2434.012 kb on - strand, within HP15_2312at 2434.062 kb on - strand, within HP15_2312at 2434.088 kb on + strand, within HP15_2312at 2434.144 kb on + strand, within HP15_2312at 2434.167 kb on + strand, within HP15_2312at 2434.175 kb on - strand, within HP15_2312at 2434.214 kb on + strand, within HP15_2312at 2434.263 kb on + strand, within HP15_2312at 2434.270 kb on + strand, within HP15_2312at 2434.293 kb on + strand, within HP15_2312at 2434.295 kb on + strand, within HP15_2312at 2434.395 kb on - strand, within HP15_2312at 2434.427 kb on + strand, within HP15_2312at 2434.542 kb on - strandat 2434.587 kb on + strandat 2434.611 kb on + strandat 2434.611 kb on + strandat 2434.705 kb on - strand, within HP15_2313at 2434.707 kb on - strand, within HP15_2313at 2434.731 kb on - strand, within HP15_2313at 2434.763 kb on - strand, within HP15_2313at 2434.860 kb on - strand, within HP15_2313at 2434.903 kb on + strand, within HP15_2313at 2434.937 kb on - strand, within HP15_2313at 2435.084 kb on - strandat 2435.141 kb on + strand, within HP15_2314at 2435.154 kb on - strand, within HP15_2314at 2435.295 kb on + strand, within HP15_2314at 2435.314 kb on + strand, within HP15_2314at 2435.322 kb on - strand, within HP15_2314at 2435.337 kb on + strand, within HP15_2314at 2435.627 kb on - strand, within HP15_2315at 2435.750 kb on - strand, within HP15_2315at 2435.768 kb on + strand, within HP15_2315at 2435.769 kb on + strand, within HP15_2315at 2435.878 kb on - strand, within HP15_2315

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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2,433,658 - HP15_2311 0.47 +2.3
2,433,690 + HP15_2311 0.59 +2.1
2,433,690 + HP15_2311 0.59 +2.5
2,433,697 + HP15_2311 0.62 +1.7
2,433,723 - HP15_2311 0.71 +1.9
2,433,758 - HP15_2311 0.84 +2.4
2,433,831 - +2.1
2,433,896 - HP15_2312 0.11 +1.7
2,433,925 - HP15_2312 0.15 +2.1
2,434,012 - HP15_2312 0.26 +2.4
2,434,062 - HP15_2312 0.33 +2.4
2,434,088 + HP15_2312 0.36 +2.2
2,434,144 + HP15_2312 0.43 +2.1
2,434,167 + HP15_2312 0.46 +2.3
2,434,175 - HP15_2312 0.47 +1.6
2,434,214 + HP15_2312 0.52 +2.5
2,434,263 + HP15_2312 0.59 +2.1
2,434,270 + HP15_2312 0.59 +2.2
2,434,293 + HP15_2312 0.62 +1.5
2,434,295 + HP15_2312 0.63 +1.6
2,434,395 - HP15_2312 0.76 +2.9
2,434,427 + HP15_2312 0.80 +2.0
2,434,542 - +2.4
2,434,587 + +1.7
2,434,611 + +1.9
2,434,611 + +0.4
2,434,705 - HP15_2313 0.26 +2.2
2,434,707 - HP15_2313 0.26 +1.7
2,434,731 - HP15_2313 0.32 +2.7
2,434,763 - HP15_2313 0.39 +3.7
2,434,860 - HP15_2313 0.60 +2.0
2,434,903 + HP15_2313 0.70 +1.9
2,434,937 - HP15_2313 0.77 +1.8
2,435,084 - +1.7
2,435,141 + HP15_2314 0.21 +2.4
2,435,154 - HP15_2314 0.23 +1.4
2,435,295 + HP15_2314 0.52 +1.7
2,435,314 + HP15_2314 0.56 +2.0
2,435,322 - HP15_2314 0.57 +1.6
2,435,337 + HP15_2314 0.60 +1.7
2,435,627 - HP15_2315 0.10 +1.4
2,435,750 - HP15_2315 0.23 +2.1
2,435,768 + HP15_2315 0.24 +2.0
2,435,769 + HP15_2315 0.25 +0.8
2,435,878 - HP15_2315 0.35 +2.2

Or see this region's nucleotide sequence