Strain Fitness in Marinobacter adhaerens HP15 around HP15_2133

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2132 and HP15_2133 are separated by 99 nucleotidesHP15_2133 and HP15_2134 are separated by 24 nucleotides HP15_2132: HP15_2132 - polyhydroxyalkanoic acid synthase, at 2,232,819 to 2,234,621 _2132 HP15_2133: HP15_2133 - solute symporter-like protein, at 2,234,721 to 2,236,085 _2133 HP15_2134: HP15_2134 - conserved hypothetical protein, at 2,236,110 to 2,237,111 _2134 Position (kb) 2234 2235 2236 2237Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2233.838 kb on + strand, within HP15_2132at 2233.921 kb on - strand, within HP15_2132at 2234.007 kb on + strand, within HP15_2132at 2234.015 kb on - strand, within HP15_2132at 2234.149 kb on + strand, within HP15_2132at 2234.208 kb on - strand, within HP15_2132at 2234.221 kb on + strand, within HP15_2132at 2234.269 kb on + strand, within HP15_2132at 2234.315 kb on + strand, within HP15_2132at 2234.443 kb on + strandat 2234.599 kb on - strandat 2234.616 kb on + strandat 2234.895 kb on - strand, within HP15_2133at 2235.053 kb on + strand, within HP15_2133at 2235.212 kb on + strand, within HP15_2133at 2235.559 kb on + strand, within HP15_2133at 2235.572 kb on - strand, within HP15_2133at 2235.607 kb on - strand, within HP15_2133at 2235.622 kb on - strand, within HP15_2133at 2235.633 kb on + strand, within HP15_2133at 2235.738 kb on + strand, within HP15_2133at 2235.858 kb on - strand, within HP15_2133at 2235.897 kb on + strand, within HP15_2133at 2236.031 kb on + strandat 2236.036 kb on + strandat 2236.054 kb on - strandat 2236.054 kb on - strandat 2236.193 kb on - strandat 2236.264 kb on - strand, within HP15_2134at 2236.283 kb on + strand, within HP15_2134at 2236.443 kb on - strand, within HP15_2134at 2236.463 kb on - strand, within HP15_2134at 2236.496 kb on + strand, within HP15_2134at 2236.660 kb on + strand, within HP15_2134at 2236.699 kb on + strand, within HP15_2134at 2236.834 kb on + strand, within HP15_2134at 2236.834 kb on + strand, within HP15_2134at 2236.842 kb on - strand, within HP15_2134at 2236.985 kb on + strand, within HP15_2134

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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2,233,838 + HP15_2132 0.57 -0.4
2,233,921 - HP15_2132 0.61 -0.7
2,234,007 + HP15_2132 0.66 +0.1
2,234,015 - HP15_2132 0.66 -0.3
2,234,149 + HP15_2132 0.74 +1.4
2,234,208 - HP15_2132 0.77 -2.0
2,234,221 + HP15_2132 0.78 +2.3
2,234,269 + HP15_2132 0.80 -1.2
2,234,315 + HP15_2132 0.83 -2.7
2,234,443 + -0.6
2,234,599 - +3.9
2,234,616 + +2.0
2,234,895 - HP15_2133 0.13 +0.7
2,235,053 + HP15_2133 0.24 +1.3
2,235,212 + HP15_2133 0.36 -1.1
2,235,559 + HP15_2133 0.61 +0.8
2,235,572 - HP15_2133 0.62 -0.5
2,235,607 - HP15_2133 0.65 -0.5
2,235,622 - HP15_2133 0.66 -1.6
2,235,633 + HP15_2133 0.67 -1.1
2,235,738 + HP15_2133 0.75 -0.0
2,235,858 - HP15_2133 0.83 +1.9
2,235,897 + HP15_2133 0.86 +0.5
2,236,031 + +0.3
2,236,036 + +1.9
2,236,054 - -0.5
2,236,054 - -0.8
2,236,193 - +0.4
2,236,264 - HP15_2134 0.15 +2.5
2,236,283 + HP15_2134 0.17 +1.1
2,236,443 - HP15_2134 0.33 -1.9
2,236,463 - HP15_2134 0.35 +0.9
2,236,496 + HP15_2134 0.39 -0.6
2,236,660 + HP15_2134 0.55 +0.5
2,236,699 + HP15_2134 0.59 -0.6
2,236,834 + HP15_2134 0.72 -0.1
2,236,834 + HP15_2134 0.72 +3.0
2,236,842 - HP15_2134 0.73 -1.7
2,236,985 + HP15_2134 0.87 +1.5

Or see this region's nucleotide sequence