Strain Fitness in Marinobacter adhaerens HP15 around HP15_1919

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1918 and HP15_1919 overlap by 1 nucleotidesHP15_1919 and HP15_1920 overlap by 7 nucleotides HP15_1918: HP15_1918 - PEP-CTERM system-associated, FemAB-related protein, at 2,033,508 to 2,034,569 _1918 HP15_1919: HP15_1919 - protein involved in cellulose biosynthesis (CelD)-like protein, at 2,034,569 to 2,035,693 _1919 HP15_1920: HP15_1920 - WalW protein, at 2,035,687 to 2,036,685 _1920 Position (kb) 2034 2035 2036Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2033.685 kb on - strand, within HP15_1918at 2033.876 kb on - strand, within HP15_1918at 2033.877 kb on + strand, within HP15_1918at 2033.936 kb on + strand, within HP15_1918at 2033.944 kb on - strand, within HP15_1918at 2034.036 kb on - strand, within HP15_1918at 2034.176 kb on - strand, within HP15_1918at 2034.426 kb on + strand, within HP15_1918at 2034.434 kb on - strand, within HP15_1918at 2034.513 kb on + strandat 2034.526 kb on + strandat 2034.628 kb on + strandat 2034.628 kb on + strandat 2034.632 kb on + strandat 2034.634 kb on + strandat 2034.636 kb on - strandat 2034.644 kb on + strandat 2034.932 kb on + strand, within HP15_1919at 2034.940 kb on - strand, within HP15_1919at 2035.144 kb on + strand, within HP15_1919at 2035.154 kb on + strand, within HP15_1919at 2035.197 kb on - strand, within HP15_1919at 2035.386 kb on - strand, within HP15_1919at 2035.388 kb on + strand, within HP15_1919at 2035.480 kb on + strand, within HP15_1919at 2035.488 kb on - strand, within HP15_1919at 2035.853 kb on - strand, within HP15_1920at 2036.018 kb on + strand, within HP15_1920at 2036.031 kb on - strand, within HP15_1920at 2036.031 kb on - strand, within HP15_1920at 2036.031 kb on - strand, within HP15_1920at 2036.195 kb on - strand, within HP15_1920at 2036.260 kb on - strand, within HP15_1920at 2036.298 kb on + strand, within HP15_1920at 2036.551 kb on + strand, within HP15_1920at 2036.624 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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2,033,685 - HP15_1918 0.17 +1.9
2,033,876 - HP15_1918 0.35 +2.0
2,033,877 + HP15_1918 0.35 -0.2
2,033,936 + HP15_1918 0.40 -0.9
2,033,944 - HP15_1918 0.41 -0.9
2,034,036 - HP15_1918 0.50 -1.2
2,034,176 - HP15_1918 0.63 +2.0
2,034,426 + HP15_1918 0.86 +2.1
2,034,434 - HP15_1918 0.87 -0.2
2,034,513 + -1.1
2,034,526 + -2.9
2,034,628 + +0.9
2,034,628 + -1.0
2,034,632 + -0.2
2,034,634 + +0.2
2,034,636 - +2.4
2,034,644 + +2.3
2,034,932 + HP15_1919 0.32 -0.3
2,034,940 - HP15_1919 0.33 -1.2
2,035,144 + HP15_1919 0.51 -1.7
2,035,154 + HP15_1919 0.52 +0.2
2,035,197 - HP15_1919 0.56 +0.0
2,035,386 - HP15_1919 0.73 -2.2
2,035,388 + HP15_1919 0.73 -1.1
2,035,480 + HP15_1919 0.81 -1.5
2,035,488 - HP15_1919 0.82 +1.1
2,035,853 - HP15_1920 0.17 +2.1
2,036,018 + HP15_1920 0.33 -1.0
2,036,031 - HP15_1920 0.34 +2.5
2,036,031 - HP15_1920 0.34 -1.7
2,036,031 - HP15_1920 0.34 -0.4
2,036,195 - HP15_1920 0.51 -0.4
2,036,260 - HP15_1920 0.57 +0.3
2,036,298 + HP15_1920 0.61 -1.5
2,036,551 + HP15_1920 0.86 +0.5
2,036,624 + -0.6

Or see this region's nucleotide sequence