Experiment: L-Arginine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1750 and HP15_1751 are separated by 57 nucleotides HP15_1751 and HP15_1752 are separated by 228 nucleotides HP15_1752 and HP15_1753 are separated by 28 nucleotides HP15_1753 and HP15_1754 are separated by 10 nucleotides
HP15_1750: HP15_1750 - saccharopine dehydrogenase-like protein, at 1,850,088 to 1,851,329
_1750
HP15_1751: HP15_1751 - conserved hypothetical protein, membrane, at 1,851,387 to 1,851,803
_1751
HP15_1752: HP15_1752 - conserved hypothetical protein, at 1,852,032 to 1,852,340
_1752
HP15_1753: HP15_1753 - conserved hypothetical protein, secreted, at 1,852,369 to 1,852,842
_1753
HP15_1754: HP15_1754 - rRNA (guanine-N1-)-methyltransferase A, predicted, at 1,852,853 to 1,853,638
_1754
Position (kb)
1852
1853 Strain fitness (log2 ratio)
-1
0
1
2 at 1851.086 kb on - strand, within HP15_1750 at 1851.142 kb on + strand, within HP15_1750 at 1851.165 kb on + strand, within HP15_1750 at 1851.183 kb on - strand, within HP15_1750 at 1851.224 kb on + strand at 1851.232 kb on - strand at 1851.232 kb on - strand at 1851.483 kb on + strand, within HP15_1751 at 1851.640 kb on - strand, within HP15_1751 at 1851.658 kb on + strand, within HP15_1751 at 1851.658 kb on + strand, within HP15_1751 at 1851.713 kb on + strand, within HP15_1751 at 1851.764 kb on - strand at 1851.833 kb on + strand at 1851.960 kb on + strand at 1851.960 kb on + strand at 1851.968 kb on - strand at 1852.029 kb on + strand at 1852.029 kb on + strand at 1852.029 kb on + strand at 1852.029 kb on + strand at 1852.037 kb on - strand at 1852.037 kb on - strand at 1852.078 kb on + strand, within HP15_1752 at 1852.078 kb on + strand, within HP15_1752 at 1852.078 kb on + strand, within HP15_1752 at 1852.103 kb on - strand, within HP15_1752 at 1852.180 kb on + strand, within HP15_1752 at 1852.212 kb on + strand, within HP15_1752 at 1852.504 kb on - strand, within HP15_1753 at 1852.522 kb on - strand, within HP15_1753 at 1852.656 kb on - strand, within HP15_1753 at 1852.693 kb on + strand, within HP15_1753 at 1852.815 kb on + strand at 1852.816 kb on + strand at 1852.823 kb on - strand at 1852.824 kb on - strand at 1852.871 kb on + strand at 1852.879 kb on - strand at 1852.907 kb on + strand at 1852.938 kb on - strand, within HP15_1754 at 1852.967 kb on - strand, within HP15_1754 at 1852.993 kb on - strand, within HP15_1754 at 1853.066 kb on + strand, within HP15_1754 at 1853.274 kb on + strand, within HP15_1754
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine as (N) remove 1,851,086 - HP15_1750 0.80 +1.9 1,851,142 + HP15_1750 0.85 +0.4 1,851,165 + HP15_1750 0.87 -0.1 1,851,183 - HP15_1750 0.88 -0.0 1,851,224 + +1.1 1,851,232 - +2.0 1,851,232 - +1.3 1,851,483 + HP15_1751 0.23 -0.8 1,851,640 - HP15_1751 0.61 +2.3 1,851,658 + HP15_1751 0.65 +0.1 1,851,658 + HP15_1751 0.65 -1.2 1,851,713 + HP15_1751 0.78 -1.7 1,851,764 - +0.4 1,851,833 + -0.5 1,851,960 + -0.5 1,851,960 + -1.0 1,851,968 - +1.4 1,852,029 + -1.4 1,852,029 + -1.1 1,852,029 + -1.7 1,852,029 + -0.5 1,852,037 - -0.6 1,852,037 - +0.4 1,852,078 + HP15_1752 0.15 -0.1 1,852,078 + HP15_1752 0.15 +1.9 1,852,078 + HP15_1752 0.15 -0.1 1,852,103 - HP15_1752 0.23 +1.6 1,852,180 + HP15_1752 0.48 -0.1 1,852,212 + HP15_1752 0.58 -0.4 1,852,504 - HP15_1753 0.28 +1.9 1,852,522 - HP15_1753 0.32 +1.7 1,852,656 - HP15_1753 0.61 +2.2 1,852,693 + HP15_1753 0.68 -0.5 1,852,815 + -0.6 1,852,816 + +1.6 1,852,823 - -0.8 1,852,824 - +0.9 1,852,871 + +2.2 1,852,879 - +0.3 1,852,907 + +1.6 1,852,938 - HP15_1754 0.11 -1.5 1,852,967 - HP15_1754 0.15 -0.0 1,852,993 - HP15_1754 0.18 +0.5 1,853,066 + HP15_1754 0.27 -1.1 1,853,274 + HP15_1754 0.54 -0.3
Or see this region's nucleotide sequence