Experiment: L-Arginine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_154 and HP15_155 overlap by 4 nucleotides HP15_155 and HP15_156 are separated by 49 nucleotides HP15_156 and HP15_157 are separated by 389 nucleotides
HP15_154: HP15_154 - membrane protein, at 154,654 to 154,956
_154
HP15_155: HP15_155 - conserved hypothetical protein, membrane, at 154,953 to 155,630
_155
HP15_156: HP15_156 - conserved hypothetical protein, at 155,680 to 155,997
_156
HP15_157: HP15_157 - conserved hypothetical protein, at 156,387 to 156,779
_157
Position (kb) 154
155
156 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 153.970 kb on + strand at 154.131 kb on - strand at 154.187 kb on + strand at 154.201 kb on - strand at 154.233 kb on - strand at 154.252 kb on - strand at 154.325 kb on + strand at 154.420 kb on - strand at 154.443 kb on + strand at 154.461 kb on - strand at 154.461 kb on - strand at 154.473 kb on - strand at 154.494 kb on - strand at 154.552 kb on + strand at 154.588 kb on - strand at 154.613 kb on - strand at 154.617 kb on + strand at 154.617 kb on + strand at 154.625 kb on - strand at 154.738 kb on + strand, within HP15_154 at 154.746 kb on - strand, within HP15_154 at 154.761 kb on - strand, within HP15_154 at 154.761 kb on - strand, within HP15_154 at 154.777 kb on + strand, within HP15_154 at 154.824 kb on + strand, within HP15_154 at 154.832 kb on - strand, within HP15_154 at 154.861 kb on + strand, within HP15_154 at 154.861 kb on + strand, within HP15_154 at 154.902 kb on + strand, within HP15_154 at 154.910 kb on - strand, within HP15_154 at 154.979 kb on + strand at 154.989 kb on - strand at 155.001 kb on + strand at 155.009 kb on + strand at 155.009 kb on + strand at 155.023 kb on - strand, within HP15_155 at 155.035 kb on + strand, within HP15_155 at 155.134 kb on - strand, within HP15_155 at 155.147 kb on - strand, within HP15_155 at 155.163 kb on + strand, within HP15_155 at 155.322 kb on + strand, within HP15_155 at 155.354 kb on - strand, within HP15_155 at 155.363 kb on - strand, within HP15_155 at 155.380 kb on - strand, within HP15_155 at 155.519 kb on + strand, within HP15_155 at 155.519 kb on + strand, within HP15_155 at 155.519 kb on + strand, within HP15_155 at 155.534 kb on - strand, within HP15_155 at 155.538 kb on + strand, within HP15_155 at 155.546 kb on - strand, within HP15_155 at 155.546 kb on - strand, within HP15_155 at 155.571 kb on + strand at 155.571 kb on + strand at 155.579 kb on - strand at 155.598 kb on - strand at 155.598 kb on - strand at 155.630 kb on + strand at 155.639 kb on + strand at 155.639 kb on + strand at 155.649 kb on - strand at 155.683 kb on - strand at 155.688 kb on + strand at 155.698 kb on + strand at 155.788 kb on + strand, within HP15_156 at 155.882 kb on + strand, within HP15_156 at 155.884 kb on - strand, within HP15_156 at 155.884 kb on - strand, within HP15_156 at 155.999 kb on - strand at 155.999 kb on - strand at 156.004 kb on - strand at 156.009 kb on - strand at 156.022 kb on - strand at 156.048 kb on + strand at 156.156 kb on + strand at 156.156 kb on + strand at 156.187 kb on + strand at 156.280 kb on + strand at 156.280 kb on + strand at 156.288 kb on - strand at 156.316 kb on - strand at 156.343 kb on - strand at 156.381 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine as (N) remove 153,970 + +0.5 154,131 - +1.5 154,187 + -0.3 154,201 - -1.3 154,233 - +0.8 154,252 - +2.3 154,325 + -0.7 154,420 - -3.8 154,443 + +2.0 154,461 - +3.0 154,461 - -1.1 154,473 - -0.0 154,494 - +0.1 154,552 + -0.6 154,588 - -0.8 154,613 - +2.0 154,617 + -1.4 154,617 + -2.5 154,625 - -0.8 154,738 + HP15_154 0.28 +1.8 154,746 - HP15_154 0.30 +2.0 154,761 - HP15_154 0.35 -0.2 154,761 - HP15_154 0.35 -0.6 154,777 + HP15_154 0.41 -0.7 154,824 + HP15_154 0.56 +1.9 154,832 - HP15_154 0.59 +1.8 154,861 + HP15_154 0.68 +0.3 154,861 + HP15_154 0.68 -0.4 154,902 + HP15_154 0.82 -0.4 154,910 - HP15_154 0.84 -0.4 154,979 + -1.9 154,989 - -0.4 155,001 + +2.1 155,009 + -0.8 155,009 + -0.4 155,023 - HP15_155 0.10 -0.3 155,035 + HP15_155 0.12 +1.8 155,134 - HP15_155 0.27 -0.8 155,147 - HP15_155 0.29 -1.2 155,163 + HP15_155 0.31 +0.3 155,322 + HP15_155 0.54 -1.4 155,354 - HP15_155 0.59 +0.9 155,363 - HP15_155 0.60 -0.8 155,380 - HP15_155 0.63 -1.6 155,519 + HP15_155 0.83 -1.4 155,519 + HP15_155 0.83 +0.9 155,519 + HP15_155 0.83 +1.6 155,534 - HP15_155 0.86 +1.1 155,538 + HP15_155 0.86 -1.1 155,546 - HP15_155 0.87 +0.6 155,546 - HP15_155 0.87 -0.3 155,571 + +1.8 155,571 + +0.2 155,579 - +2.0 155,598 - -1.5 155,598 - +1.1 155,630 + -1.2 155,639 + +1.6 155,639 + -0.7 155,649 - +2.3 155,683 - -1.4 155,688 + +0.0 155,698 + +0.2 155,788 + HP15_156 0.34 -0.1 155,882 + HP15_156 0.64 +1.0 155,884 - HP15_156 0.64 -0.5 155,884 - HP15_156 0.64 -0.7 155,999 - +2.2 155,999 - -0.1 156,004 - +2.4 156,009 - +0.3 156,022 - +1.5 156,048 + +3.3 156,156 + +0.2 156,156 + +2.3 156,187 + -0.6 156,280 + +0.3 156,280 + -0.5 156,288 - +1.6 156,316 - +1.0 156,343 - +0.8 156,381 + +0.7
Or see this region's nucleotide sequence