Strain Fitness in Marinobacter adhaerens HP15 around HP15_1393

Experiment: L-Arginine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1390 and HP15_1391 are separated by 13 nucleotidesHP15_1391 and HP15_1392 are separated by 47 nucleotidesHP15_1392 and HP15_1393 are separated by 18 nucleotidesHP15_1393 and HP15_1394 overlap by 4 nucleotidesHP15_1394 and HP15_1395 are separated by 248 nucleotides HP15_1390: HP15_1390 - peptidase M48, Ste24p, at 1,466,067 to 1,467,344 _1390 HP15_1391: HP15_1391 - hypothetical protein, at 1,467,358 to 1,467,495 _1391 HP15_1392: HP15_1392 - membrane protein containing DUF599, at 1,467,543 to 1,468,283 _1392 HP15_1393: HP15_1393 - thioesterase superfamily protein, at 1,468,302 to 1,468,772 _1393 HP15_1394: HP15_1394 - thioesterase superfamily protein, at 1,468,769 to 1,469,203 _1394 HP15_1395: HP15_1395 - heat shock protein 90, at 1,469,452 to 1,471,344 _1395 Position (kb) 1468 1469Strain fitness (log2 ratio) -2 -1 0 1 2at 1467.381 kb on + strand, within HP15_1391at 1467.381 kb on + strand, within HP15_1391at 1467.600 kb on - strandat 1467.660 kb on - strand, within HP15_1392at 1467.740 kb on + strand, within HP15_1392at 1467.753 kb on + strand, within HP15_1392at 1467.811 kb on + strand, within HP15_1392at 1467.811 kb on - strand, within HP15_1392at 1467.819 kb on - strand, within HP15_1392at 1467.830 kb on + strand, within HP15_1392at 1467.888 kb on + strand, within HP15_1392at 1468.078 kb on - strand, within HP15_1392at 1468.156 kb on + strand, within HP15_1392at 1468.216 kb on + strandat 1468.290 kb on + strandat 1468.298 kb on - strandat 1468.347 kb on + strandat 1468.356 kb on - strand, within HP15_1393at 1468.361 kb on - strand, within HP15_1393at 1468.404 kb on + strand, within HP15_1393at 1468.410 kb on - strand, within HP15_1393at 1468.418 kb on + strand, within HP15_1393at 1468.418 kb on + strand, within HP15_1393at 1468.418 kb on + strand, within HP15_1393at 1468.477 kb on + strand, within HP15_1393at 1468.497 kb on + strand, within HP15_1393at 1468.566 kb on + strand, within HP15_1393at 1468.607 kb on - strand, within HP15_1393at 1468.759 kb on - strandat 1468.921 kb on + strand, within HP15_1394at 1469.047 kb on + strand, within HP15_1394at 1469.310 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine as (N)
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1,467,381 + HP15_1391 0.17 -0.4
1,467,381 + HP15_1391 0.17 -0.8
1,467,600 - -0.4
1,467,660 - HP15_1392 0.16 -2.2
1,467,740 + HP15_1392 0.27 +0.3
1,467,753 + HP15_1392 0.28 -0.6
1,467,811 + HP15_1392 0.36 +2.2
1,467,811 - HP15_1392 0.36 -0.8
1,467,819 - HP15_1392 0.37 -0.5
1,467,830 + HP15_1392 0.39 +0.9
1,467,888 + HP15_1392 0.47 +0.9
1,468,078 - HP15_1392 0.72 +0.1
1,468,156 + HP15_1392 0.83 -1.8
1,468,216 + -0.2
1,468,290 + +0.1
1,468,298 - +2.1
1,468,347 + +0.3
1,468,356 - HP15_1393 0.11 -0.6
1,468,361 - HP15_1393 0.13 +1.8
1,468,404 + HP15_1393 0.22 +2.4
1,468,410 - HP15_1393 0.23 +0.1
1,468,418 + HP15_1393 0.25 +0.0
1,468,418 + HP15_1393 0.25 +0.9
1,468,418 + HP15_1393 0.25 -1.3
1,468,477 + HP15_1393 0.37 -0.2
1,468,497 + HP15_1393 0.41 +1.9
1,468,566 + HP15_1393 0.56 -0.5
1,468,607 - HP15_1393 0.65 -0.6
1,468,759 - +1.9
1,468,921 + HP15_1394 0.35 +2.1
1,469,047 + HP15_1394 0.64 +1.1
1,469,310 + -0.6

Or see this region's nucleotide sequence