Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3113
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,925,283 | + | -0.0 | |||
3,925,487 | - | -0.3 | |||
3,925,573 | - | DvMF_3112 | 0.30 | -0.4 | |
3,925,876 | - | -1.1 | |||
3,925,977 | + | -0.4 | |||
3,926,055 | + | DvMF_3113 | 0.13 | -0.9 | |
3,926,094 | - | DvMF_3113 | 0.16 | -0.4 | |
3,926,166 | + | DvMF_3113 | 0.20 | -0.3 | |
3,926,256 | - | DvMF_3113 | 0.25 | +0.0 | |
3,926,287 | - | DvMF_3113 | 0.26 | -0.5 | |
3,926,322 | + | DvMF_3113 | 0.28 | -0.7 | |
3,926,353 | + | DvMF_3113 | 0.30 | -1.0 | |
3,926,366 | + | DvMF_3113 | 0.31 | -1.1 | |
3,926,482 | + | DvMF_3113 | 0.37 | -1.2 | |
3,926,541 | - | DvMF_3113 | 0.41 | -0.4 | |
3,926,576 | - | DvMF_3113 | 0.43 | +0.3 | |
3,926,576 | - | DvMF_3113 | 0.43 | -0.7 | |
3,926,634 | + | DvMF_3113 | 0.46 | -0.5 | |
3,926,634 | + | DvMF_3113 | 0.46 | -0.6 | |
3,926,937 | - | DvMF_3113 | 0.63 | -0.4 | |
3,927,244 | + | DvMF_3113 | 0.81 | -0.8 | |
3,927,356 | + | DvMF_3113 | 0.87 | +0.2 | |
3,927,527 | + | -0.2 | |||
3,927,535 | - | -0.4 | |||
3,927,657 | + | -0.6 | |||
3,927,827 | - | -1.2 | |||
3,928,284 | + | DvMF_3114 | 0.17 | -1.6 | |
3,928,300 | + | DvMF_3114 | 0.17 | -0.7 | |
3,928,302 | - | DvMF_3114 | 0.17 | -0.2 | |
3,928,429 | - | DvMF_3114 | 0.21 | -0.6 |
Or see this region's nucleotide sequence