Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3109
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,919,969 | - | DvMF_3108 | 0.38 | -0.6 | |
3,920,010 | + | DvMF_3108 | 0.42 | +0.0 | |
3,920,134 | + | DvMF_3108 | 0.54 | -0.0 | |
3,920,304 | + | DvMF_3108 | 0.71 | -0.4 | |
3,920,400 | - | DvMF_3108 | 0.80 | -0.5 | |
3,920,600 | + | -0.6 | |||
3,921,115 | + | DvMF_3109 | 0.18 | -1.0 | |
3,921,853 | + | DvMF_3109 | 0.55 | -3.0 | |
3,921,860 | - | DvMF_3109 | 0.56 | -3.0 | |
3,921,860 | - | DvMF_3109 | 0.56 | -4.4 | |
3,922,179 | + | DvMF_3109 | 0.71 | -4.1 | |
3,922,262 | + | DvMF_3109 | 0.76 | -3.5 | |
3,922,726 | + | -2.6 | |||
3,923,563 | - | -1.5 | |||
3,923,563 | - | -0.8 | |||
3,923,601 | + | -1.7 | |||
3,923,721 | + | -1.2 |
Or see this region's nucleotide sequence