Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2738
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,462,799 | - | -0.3 | |||
3,462,828 | - | DvMF_2737 | 0.11 | -0.3 | |
3,462,870 | + | DvMF_2737 | 0.16 | -0.1 | |
3,462,937 | + | DvMF_2737 | 0.23 | -0.3 | |
3,463,069 | - | DvMF_2737 | 0.36 | -0.0 | |
3,463,503 | - | DvMF_2737 | 0.81 | -1.7 | |
3,463,567 | - | DvMF_2737 | 0.88 | +1.7 | |
3,463,616 | + | +0.1 | |||
3,464,213 | + | DvMF_2738 | 0.27 | -0.8 | |
3,464,351 | - | DvMF_2738 | 0.34 | -0.1 | |
3,464,728 | + | DvMF_2738 | 0.54 | -0.5 | |
3,464,781 | - | DvMF_2738 | 0.57 | -0.4 | |
3,465,015 | + | DvMF_2738 | 0.69 | +0.0 | |
3,465,194 | + | DvMF_2738 | 0.79 | +0.3 | |
3,465,399 | - | DvMF_2738 | 0.90 | -0.1 | |
3,465,417 | - | -0.2 | |||
3,465,453 | + | -0.6 | |||
3,465,535 | - | -1.4 | |||
3,465,597 | + | -1.1 | |||
3,465,851 | + | DvMF_2739 | 0.18 | -0.6 | |
3,465,938 | - | DvMF_2739 | 0.24 | -0.5 | |
3,466,248 | + | DvMF_2739 | 0.45 | -1.4 | |
3,466,248 | + | DvMF_2739 | 0.45 | -0.3 | |
3,466,256 | - | DvMF_2739 | 0.46 | -1.5 | |
3,466,264 | - | DvMF_2739 | 0.46 | -0.7 | |
3,466,444 | + | DvMF_2739 | 0.59 | -1.1 |
Or see this region's nucleotide sequence