Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2582
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,264,960 | - | DvMF_2581 | 0.42 | -0.2 | |
3,264,970 | + | DvMF_2581 | 0.43 | -0.3 | |
3,265,042 | + | DvMF_2581 | 0.51 | -0.5 | |
3,265,093 | - | DvMF_2581 | 0.56 | +0.5 | |
3,265,168 | - | DvMF_2581 | 0.63 | -0.4 | |
3,265,170 | + | DvMF_2581 | 0.64 | -0.1 | |
3,265,173 | - | DvMF_2581 | 0.64 | -1.3 | |
3,265,434 | + | +0.4 | |||
3,265,785 | + | -1.2 | |||
3,265,798 | - | -0.8 | |||
3,266,002 | - | DvMF_2582 | 0.12 | -0.4 | |
3,266,062 | + | DvMF_2582 | 0.18 | -0.4 | |
3,266,067 | + | DvMF_2582 | 0.19 | -0.4 | |
3,266,102 | - | DvMF_2582 | 0.22 | -0.7 | |
3,266,185 | - | DvMF_2582 | 0.30 | -0.6 | |
3,266,291 | + | DvMF_2582 | 0.40 | -0.5 | |
3,266,323 | - | DvMF_2582 | 0.43 | -0.9 | |
3,266,373 | + | DvMF_2582 | 0.47 | -0.3 | |
3,266,531 | - | DvMF_2582 | 0.62 | -0.5 | |
3,266,544 | + | DvMF_2582 | 0.63 | -1.3 | |
3,266,554 | - | DvMF_2582 | 0.64 | -0.3 | |
3,266,563 | + | DvMF_2582 | 0.65 | -0.3 | |
3,266,604 | + | DvMF_2582 | 0.69 | -0.2 | |
3,266,612 | - | DvMF_2582 | 0.70 | -0.5 | |
3,266,705 | - | DvMF_2582 | 0.78 | -0.6 | |
3,266,928 | + | -0.6 | |||
3,267,001 | - | -0.4 | |||
3,267,001 | - | -0.0 | |||
3,267,138 | - | -0.5 | |||
3,267,501 | - | DvMF_2583 | 0.22 | -1.3 | |
3,267,643 | - | DvMF_2583 | 0.45 | -1.2 |
Or see this region's nucleotide sequence