Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2092
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,605,750 | - | DvMF_2091 | 0.78 | +0.6 | |
2,605,775 | - | DvMF_2091 | 0.79 | +0.5 | |
2,606,370 | + | +0.0 | |||
2,606,631 | + | +0.9 | |||
2,606,852 | + | +0.0 | |||
2,606,860 | - | +0.3 | |||
2,606,953 | + | DvMF_2092 | 0.15 | +0.5 | |
2,606,955 | + | DvMF_2092 | 0.16 | +0.1 | |
2,606,961 | - | DvMF_2092 | 0.16 | +0.3 | |
2,607,079 | + | DvMF_2092 | 0.24 | +0.5 | |
2,607,099 | + | DvMF_2092 | 0.26 | +0.7 | |
2,607,129 | - | DvMF_2092 | 0.28 | +0.2 | |
2,607,157 | + | DvMF_2092 | 0.30 | -0.1 | |
2,607,290 | + | DvMF_2092 | 0.39 | +0.2 | |
2,607,372 | - | DvMF_2092 | 0.45 | +0.2 | |
2,607,495 | + | DvMF_2092 | 0.53 | +0.6 | |
2,607,534 | - | DvMF_2092 | 0.56 | +0.4 | |
2,607,560 | + | DvMF_2092 | 0.58 | +0.0 | |
2,607,851 | - | DvMF_2092 | 0.78 | +0.1 | |
2,607,853 | + | DvMF_2092 | 0.78 | +0.3 | |
2,607,853 | + | DvMF_2092 | 0.78 | +0.6 | |
2,608,092 | + | +2.0 | |||
2,608,177 | + | -0.5 | |||
2,608,222 | + | -0.5 | |||
2,608,229 | + | +0.3 | |||
2,608,587 | - | +0.3 | |||
2,608,664 | - | +0.6 | |||
2,608,670 | - | +0.3 | |||
2,608,710 | - | -0.7 | |||
2,608,891 | - | DvMF_2094 | 0.13 | +0.1 | |
2,609,164 | + | DvMF_2094 | 0.24 | -0.3 |
Or see this region's nucleotide sequence