Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1444

Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1443 and prfA are separated by 3 nucleotidesprfA and DvMF_1445 are separated by 228 nucleotides DvMF_1443: DvMF_1443 - protein of unknown function DUF1385 (RefSeq), at 1,764,461 to 1,765,540 _1443 DvMF_1444: prfA - peptide chain release factor 1 (RefSeq), at 1,765,544 to 1,766,617 prfA DvMF_1445: DvMF_1445 - protein-(glutamine-N5) methyltransferase, release factor-specific (RefSeq), at 1,766,846 to 1,767,955 _1445 Position (kb) 1765 1766 1767Strain fitness (log2 ratio) -1 0 1at 1765.535 kb on + strandat 1766.741 kb on + strandat 1766.763 kb on + strandat 1766.790 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml
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1,765,535 + -0.5
1,766,741 + -0.2
1,766,763 + -0.4
1,766,790 + -0.4

Or see this region's nucleotide sequence