Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1353

Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntrpsF and rpsR are separated by 1 nucleotidesrpsR and rplI are separated by 9 nucleotidesrplI and DvMF_1353 are separated by 82 nucleotides DvMF_1350: rpsF - 30S ribosomal protein S6 (RefSeq), at 1,648,991 to 1,649,296 rpsF DvMF_1351: rpsR - 30S ribosomal protein S18 (RefSeq), at 1,649,298 to 1,649,561 rpsR DvMF_1352: rplI - 50S ribosomal protein L9 (RefSeq), at 1,649,571 to 1,650,074 rplI DvMF_1353: DvMF_1353 - replicative DNA helicase (RefSeq), at 1,650,157 to 1,651,509 _1353 Position (kb) 1650 1651 1652Strain fitness (log2 ratio) -1 0 1at 1651.674 kb on + strandat 1651.739 kb on + strandat 1651.743 kb on + strandat 1651.928 kb on + strandat 1652.042 kb on + strandat 1652.149 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml
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1,651,674 + -0.3
1,651,739 + +0.0
1,651,743 + -0.5
1,651,928 + -0.7
1,652,042 + +0.1
1,652,149 - -0.1

Or see this region's nucleotide sequence