Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0921
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,112,189 | - | DvMF_0920 | 0.17 | -1.5 | |
1,112,203 | - | DvMF_0920 | 0.19 | -1.8 | |
1,112,417 | + | DvMF_0920 | 0.39 | -1.5 | |
1,112,477 | - | DvMF_0920 | 0.45 | +0.8 | |
1,112,601 | + | DvMF_0920 | 0.57 | -1.4 | |
1,112,687 | - | DvMF_0920 | 0.66 | -1.1 | |
1,112,699 | + | DvMF_0920 | 0.67 | -1.6 | |
1,112,699 | + | DvMF_0920 | 0.67 | -1.6 | |
1,112,707 | - | DvMF_0920 | 0.68 | -1.3 | |
1,112,891 | + | DvMF_0920 | 0.85 | -1.1 | |
1,113,063 | - | -1.5 | |||
1,113,105 | + | -1.5 | |||
1,113,406 | + | DvMF_0921 | 0.43 | -1.8 | |
1,113,540 | + | DvMF_0921 | 0.59 | -1.3 | |
1,113,695 | + | DvMF_0921 | 0.77 | -1.2 | |
1,113,703 | - | DvMF_0921 | 0.78 | -0.7 | |
1,113,728 | + | DvMF_0921 | 0.81 | -1.2 | |
1,114,103 | - | DvMF_0922 | 0.12 | -0.4 | |
1,114,203 | - | DvMF_0922 | 0.17 | -0.0 | |
1,114,203 | - | DvMF_0922 | 0.17 | -0.1 | |
1,114,285 | - | DvMF_0922 | 0.22 | -0.3 | |
1,114,515 | + | DvMF_0922 | 0.35 | -0.2 | |
1,114,592 | - | DvMF_0922 | 0.39 | -0.1 | |
1,114,623 | + | DvMF_0922 | 0.41 | -0.0 | |
1,114,706 | + | DvMF_0922 | 0.46 | -0.2 | |
1,114,791 | - | DvMF_0922 | 0.51 | +0.0 |
Or see this region's nucleotide sequence