Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0735 and DvMF_0736 are separated by 11 nucleotides DvMF_0736 and DvMF_0737 are separated by 0 nucleotides DvMF_0737 and DvMF_0738 overlap by 4 nucleotides DvMF_0738 and DvMF_0739 are separated by 1 nucleotides DvMF_0739 and DvMF_0740 overlap by 14 nucleotides
DvMF_0735: DvMF_0735 - hypothetical protein (RefSeq), at 884,040 to 884,969
_0735
DvMF_0736: DvMF_0736 - hypothetical protein (RefSeq), at 884,981 to 885,397
_0736
DvMF_0737: DvMF_0737 - protein of unknown function DUF1320 (RefSeq), at 885,398 to 885,817
_0737
DvMF_0738: DvMF_0738 - Domain of unknown function DUF1834 (RefSeq), at 885,814 to 886,434
_0738
DvMF_0739: DvMF_0739 - hypothetical protein (RefSeq), at 886,436 to 886,639
_0739
DvMF_0740: DvMF_0740 - Mu tail sheath family protein (RefSeq), at 886,626 to 888,047
_0740
Position (kb) 885
886
887 Strain fitness (log2 ratio) -1
0
1 at 885.188 kb on + strand, within DvMF_0736 at 885.246 kb on - strand, within DvMF_0736 at 886.137 kb on - strand, within DvMF_0738 at 886.213 kb on + strand, within DvMF_0738 at 886.458 kb on + strand, within DvMF_0739 at 886.537 kb on - strand, within DvMF_0739 at 886.885 kb on + strand, within DvMF_0740 at 887.030 kb on + strand, within DvMF_0740 at 887.147 kb on + strand, within DvMF_0740 at 887.337 kb on - strand, within DvMF_0740 at 887.348 kb on + strand, within DvMF_0740
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 885,188 + DvMF_0736 0.50 +0.8 885,246 - DvMF_0736 0.64 +0.8 886,137 - DvMF_0738 0.52 +0.7 886,213 + DvMF_0738 0.64 +1.0 886,458 + DvMF_0739 0.11 +1.0 886,537 - DvMF_0739 0.50 +0.9 886,885 + DvMF_0740 0.18 +1.0 887,030 + DvMF_0740 0.28 +1.2 887,147 + DvMF_0740 0.37 +0.9 887,337 - DvMF_0740 0.50 -0.4 887,348 + DvMF_0740 0.51 +0.8
Or see this region's nucleotide sequence