Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0724 and DvMF_0725 overlap by 4 nucleotides DvMF_0725 and DvMF_0726 are separated by 13 nucleotides DvMF_0726 and DvMF_0727 are separated by 1 nucleotides DvMF_0727 and DvMF_0728 overlap by 4 nucleotides DvMF_0728 and DvMF_0729 overlap by 26 nucleotides
DvMF_0724: DvMF_0724 - hypothetical protein (RefSeq), at 874,000 to 874,695
_0724
DvMF_0725: DvMF_0725 - hypothetical protein (RefSeq), at 874,692 to 874,958
_0725
DvMF_0726: DvMF_0726 - hypothetical protein (RefSeq), at 874,972 to 875,187
_0726
DvMF_0727: DvMF_0727 - Protein of unknown function DUF1804 (RefSeq), at 875,189 to 875,695
_0727
DvMF_0728: DvMF_0728 - phage uncharacterized protein (RefSeq), at 875,692 to 877,368
_0728
DvMF_0729: DvMF_0729 - protein of unknown function DUF935 (RefSeq), at 877,343 to 879,001
_0729
Position (kb) 875
876
877
878 Strain fitness (log2 ratio) -1
0
1
2 at 874.738 kb on - strand, within DvMF_0725 at 874.761 kb on + strand, within DvMF_0725 at 875.181 kb on - strand at 875.183 kb on - strand at 875.207 kb on + strand at 875.236 kb on - strand at 875.314 kb on + strand, within DvMF_0727 at 875.422 kb on + strand, within DvMF_0727 at 875.422 kb on + strand, within DvMF_0727 at 875.972 kb on + strand, within DvMF_0728 at 876.052 kb on - strand, within DvMF_0728 at 876.144 kb on - strand, within DvMF_0728 at 876.157 kb on + strand, within DvMF_0728 at 876.288 kb on - strand, within DvMF_0728 at 876.385 kb on + strand, within DvMF_0728 at 876.516 kb on + strand, within DvMF_0728 at 876.723 kb on - strand, within DvMF_0728 at 876.918 kb on - strand, within DvMF_0728 at 877.125 kb on + strand, within DvMF_0728 at 877.363 kb on + strand at 877.363 kb on + strand at 877.800 kb on + strand, within DvMF_0729 at 877.807 kb on - strand, within DvMF_0729 at 877.976 kb on - strand, within DvMF_0729 at 878.149 kb on - strand, within DvMF_0729 at 878.296 kb on + strand, within DvMF_0729 at 878.349 kb on + strand, within DvMF_0729
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 874,738 - DvMF_0725 0.17 +1.5 874,761 + DvMF_0725 0.26 +1.8 875,181 - +1.1 875,183 - +1.0 875,207 + +0.6 875,236 - +1.1 875,314 + DvMF_0727 0.25 +1.1 875,422 + DvMF_0727 0.46 +0.1 875,422 + DvMF_0727 0.46 +1.2 875,972 + DvMF_0728 0.17 +1.4 876,052 - DvMF_0728 0.21 +1.5 876,144 - DvMF_0728 0.27 +1.2 876,157 + DvMF_0728 0.28 +0.9 876,288 - DvMF_0728 0.36 +1.8 876,385 + DvMF_0728 0.41 +1.3 876,516 + DvMF_0728 0.49 +1.6 876,723 - DvMF_0728 0.61 +1.0 876,918 - DvMF_0728 0.73 +1.2 877,125 + DvMF_0728 0.85 +1.0 877,363 + +0.6 877,363 + +0.7 877,800 + DvMF_0729 0.28 +0.8 877,807 - DvMF_0729 0.28 +1.0 877,976 - DvMF_0729 0.38 +1.0 878,149 - DvMF_0729 0.49 +0.9 878,296 + DvMF_0729 0.57 +1.2 878,349 + DvMF_0729 0.61 +1.2
Or see this region's nucleotide sequence