Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2664

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_2663 and cysS are separated by 224 nucleotidescysS and Shewana3_2665 are separated by 134 nucleotidesShewana3_2665 and Shewana3_2666 are separated by 9 nucleotides Shewana3_2663: Shewana3_2663 - methenyltetrahydrofolate cyclohydrolase (RefSeq), at 3,179,719 to 3,180,573 _2663 Shewana3_2664: cysS - cysteinyl-tRNA synthetase (RefSeq), at 3,180,798 to 3,182,183 cysS Shewana3_2665: Shewana3_2665 - peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq), at 3,182,318 to 3,182,809 _2665 Shewana3_2666: Shewana3_2666 - UDP-2,3-diacylglucosamine hydrolase (RefSeq), at 3,182,819 to 3,183,538 _2666 Position (kb) 3180 3181 3182 3183Strain fitness (log2 ratio) -1 0 1 2at 3180.554 kb on - strandat 3180.638 kb on + strandat 3180.676 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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3,180,554 - +2.2
3,180,638 + -0.2
3,180,676 - +0.4

Or see this region's nucleotide sequence