Strain Fitness in Shewanella amazonensis SB2B around Sama_3480

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
4,110,044	+		Sama_3479	0.22	+1.4
4,110,045	-		Sama_3479	0.22	+0.3
4,110,057	-		Sama_3479	0.23	+0.4
4,110,091	+		Sama_3479	0.26	-0.4
4,110,091	+		Sama_3479	0.26	+2.6
4,110,091	+		Sama_3479	0.26	-0.8
4,110,092	-		Sama_3479	0.26	+0.5
4,110,132	+		Sama_3479	0.29	-0.4
4,110,133	-		Sama_3479	0.29	-1.6
4,110,133	-		Sama_3479	0.29	-0.6
4,110,234	+		Sama_3479	0.37	+2.1
4,110,234	+		Sama_3479	0.37	-0.3
4,110,234	+		Sama_3479	0.37	-0.2
4,110,234	+		Sama_3479	0.37	+0.4
4,110,234	+		Sama_3479	0.37	+0.4
4,110,234	+		Sama_3479	0.37	-0.9
4,110,234	+		Sama_3479	0.37	+1.2
4,110,234	+		Sama_3479	0.37	-1.7
4,110,235	-		Sama_3479	0.37	+0.5
4,110,235	-		Sama_3479	0.37	-0.4
4,110,235	-		Sama_3479	0.37	+1.4
4,110,235	-		Sama_3479	0.37	-2.8
4,110,235	-		Sama_3479	0.37	+1.2
4,110,235	-		Sama_3479	0.37	+0.4
4,110,235	-		Sama_3479	0.37	+0.0
4,110,235	-		Sama_3479	0.37	-1.0
4,110,235	-		Sama_3479	0.37	+0.4
4,110,235	-		Sama_3479	0.37	-0.4
4,110,239	+		Sama_3479	0.38	-1.0
4,110,239	+		Sama_3479	0.38	+0.0
4,110,239	+		Sama_3479	0.38	-0.9
4,110,239	+		Sama_3479	0.38	+0.1
4,110,239	+		Sama_3479	0.38	-0.1
4,110,240	-		Sama_3479	0.38	-1.1
4,110,240	-		Sama_3479	0.38	-0.4
4,110,240	-		Sama_3479	0.38	-0.8
4,110,240	-		Sama_3479	0.38	+0.3
4,110,240	-		Sama_3479	0.38	+1.0
4,110,295	+		Sama_3479	0.42	-1.4
4,110,295	+		Sama_3479	0.42	-1.0
4,110,295	+		Sama_3479	0.42	-0.4
4,110,295	+		Sama_3479	0.42	+1.6
4,110,295	+		Sama_3479	0.42	+0.3
4,110,295	+		Sama_3479	0.42	+0.5
4,110,296	-		Sama_3479	0.42	+0.1
4,110,296	-		Sama_3479	0.42	-0.0
4,110,296	-		Sama_3479	0.42	+0.4
4,110,296	-		Sama_3479	0.42	-0.4
4,110,296	-		Sama_3479	0.42	+0.3
4,110,296	-		Sama_3479	0.42	-0.7
4,110,296	-		Sama_3479	0.42	-0.1
4,110,311	+		Sama_3479	0.43	+0.1
4,110,312	-		Sama_3479	0.43	-0.2
4,110,323	+		Sama_3479	0.44	+0.9
4,110,323	+		Sama_3479	0.44	+0.0
4,110,335	+		Sama_3479	0.45	+0.6
4,110,336	-		Sama_3479	0.45	+0.4
4,110,362	-		Sama_3479	0.47	-1.6
4,110,362	-		Sama_3479	0.47	+1.4
4,110,362	-		Sama_3479	0.47	-2.3
4,110,364	+		Sama_3479	0.48	-0.6
4,110,364	+		Sama_3479	0.48	-0.5
4,110,365	-		Sama_3479	0.48	-0.0
4,110,365	-		Sama_3479	0.48	+0.2
4,110,365	-		Sama_3479	0.48	-0.0
4,110,365	-		Sama_3479	0.48	+0.1
4,110,365	-		Sama_3479	0.48	-0.3
4,110,472	-		Sama_3479	0.56	+0.4
4,110,472	-		Sama_3479	0.56	+1.0
4,110,498	+		Sama_3479	0.58	-0.4
4,110,528	+		Sama_3479	0.61	-1.2
4,110,528	+		Sama_3479	0.61	+0.2
4,110,529	-		Sama_3479	0.61	+0.4
4,110,529	-		Sama_3479	0.61	+0.0
4,110,545	+		Sama_3479	0.62	-2.2
4,110,545	+		Sama_3479	0.62	+0.6
4,110,545	+		Sama_3479	0.62	-0.8
4,110,545	+		Sama_3479	0.62	+0.0
4,110,546	-		Sama_3479	0.62	+1.2
4,110,546	-		Sama_3479	0.62	-0.8
4,110,576	-		Sama_3479	0.64	+0.0
4,110,579	+		Sama_3479	0.65	-0.2
4,110,579	+		Sama_3479	0.65	+2.7
4,110,579	+		Sama_3479	0.65	+0.8
4,110,579	+		Sama_3479	0.65	+1.4
4,110,579	+		Sama_3479	0.65	+0.8
4,110,579	+		Sama_3479	0.65	+0.9
4,110,579	+		Sama_3479	0.65	-1.1
4,110,579	+		Sama_3479	0.65	+0.4
4,110,579	+		Sama_3479	0.65	-0.2
4,110,579	+		Sama_3479	0.65	+0.8
4,110,579	+		Sama_3479	0.65	+0.8
4,110,579	+		Sama_3479	0.65	-0.1
4,110,579	+		Sama_3479	0.65	-1.2
4,110,580	-		Sama_3479	0.65	-1.0
4,110,580	-		Sama_3479	0.65	+0.3
4,110,580	-		Sama_3479	0.65	-0.7
4,110,580	-		Sama_3479	0.65	-1.2
4,110,580	-		Sama_3479	0.65	+0.4
4,110,580	-		Sama_3479	0.65	+0.4
4,110,580	-		Sama_3479	0.65	+0.4
4,110,580	-		Sama_3479	0.65	+0.5
4,110,580	-		Sama_3479	0.65	-1.0
4,110,580	-		Sama_3479	0.65	-0.0
4,110,584	+		Sama_3479	0.65	+0.1
4,110,585	-		Sama_3479	0.65	+1.1
4,110,692	+		Sama_3479	0.74	+1.0
4,110,692	+		Sama_3479	0.74	-1.6
4,110,693	-		Sama_3479	0.74	+0.4
4,110,694	+		Sama_3479	0.74	-0.5
4,110,694	+		Sama_3479	0.74	+3.4
4,110,694	+		Sama_3479	0.74	-0.1
4,110,694	+		Sama_3479	0.74	+0.5
4,110,694	+		Sama_3479	0.74	-0.2
4,110,694	+		Sama_3479	0.74	-0.6
4,110,695	-		Sama_3479	0.74	+0.0
4,110,695	-		Sama_3479	0.74	+0.9
4,110,695	-		Sama_3479	0.74	+0.9
4,110,695	-		Sama_3479	0.74	+0.2
4,110,700	+		Sama_3479	0.74	+0.4
4,110,700	+		Sama_3479	0.74	+0.4
4,110,700	+		Sama_3479	0.74	+1.1
4,110,700	+		Sama_3479	0.74	+1.4
4,110,700	+		Sama_3479	0.74	+2.1
4,110,700	+		Sama_3479	0.74	-1.2
4,110,700	+		Sama_3479	0.74	+0.4
4,110,700	+		Sama_3479	0.74	+0.4
4,110,700	+		Sama_3479	0.74	-1.0
4,110,700	+		Sama_3479	0.74	+0.9
4,110,701	-		Sama_3479	0.74	+0.5
4,110,701	-		Sama_3479	0.74	-0.2
4,110,701	-		Sama_3479	0.74	+1.7
4,110,701	-		Sama_3479	0.74	-0.7
4,110,701	-		Sama_3479	0.74	+0.2
4,110,701	-		Sama_3479	0.74	-0.1
4,110,701	-		Sama_3479	0.74	-0.5
4,110,701	-		Sama_3479	0.74	-0.9
4,110,701	-		Sama_3479	0.74	+0.4
4,110,701	-		Sama_3479	0.74	+0.1
4,110,701	-		Sama_3479	0.74	+2.5
4,110,701	-		Sama_3479	0.74	-1.3
4,110,701	-		Sama_3479	0.74	+1.6
4,110,701	-		Sama_3479	0.74	+1.7
4,110,701	-		Sama_3479	0.74	+0.8
4,110,701	-		Sama_3479	0.74	+0.1
4,110,701	-		Sama_3479	0.74	-0.8
4,110,701	-		Sama_3479	0.74	-0.8
4,110,710	+		Sama_3479	0.75	-0.5
4,110,710	+		Sama_3479	0.75	-0.2
4,110,711	-		Sama_3479	0.75	-0.5
4,110,712	+		Sama_3479	0.75	+0.1
4,110,712	+		Sama_3479	0.75	+0.3
4,110,712	+		Sama_3479	0.75	-0.6
4,110,712	+		Sama_3479	0.75	-1.6
4,110,712	+		Sama_3479	0.75	-2.0
4,110,712	+		Sama_3479	0.75	+0.2
4,110,712	+		Sama_3479	0.75	-0.2
4,110,712	+		Sama_3479	0.75	+0.4
4,110,712	+		Sama_3479	0.75	+1.5
4,110,713	-		Sama_3479	0.75	+3.0
4,110,713	-		Sama_3479	0.75	+1.2
4,110,713	-		Sama_3479	0.75	+0.2
4,110,713	-		Sama_3479	0.75	-0.1
4,110,777	-		Sama_3479	0.80	+0.8
4,110,782	+		Sama_3479	0.81	+0.2
4,110,783	-		Sama_3479	0.81	-0.2
4,110,815	+		Sama_3479	0.83	+0.4
4,110,815	+		Sama_3479	0.83	+2.0
4,110,816	-		Sama_3479	0.84	-1.4
4,110,832	-		Sama_3479	0.85	+0.2
4,110,941	+				+1.1
4,110,941	+				-0.3
4,110,941	+				+0.4
4,110,941	+				-0.3
4,110,941	+				-2.6
4,110,941	+				-0.4
4,110,942	-				-0.0
4,110,945	-				-0.2
4,110,945	-				-0.3
4,111,055	-				-2.1
4,111,055	-				+0.4
4,113,452	-				-2.2
4,113,476	-				-0.3
4,113,484	-				+0.4
4,113,484	-				-2.9
4,113,484	-				-0.0
4,113,484	-				-1.2
4,113,484	-				+0.7
4,113,489	-				-1.1
4,113,489	-				-0.8
4,113,489	-				+1.4
4,113,515	+				+1.0
4,113,515	+				+1.1
4,113,516	-				-1.1
4,113,516	-				+2.0
4,113,516	-				-1.4
4,113,534	+				+0.0
4,113,534	+				-0.0
4,113,535	-				+1.2
4,113,535	-				+0.4
4,113,535	-				-0.9
4,113,535	-				-1.4
4,113,535	-				-2.5
4,113,560	-				-0.6
4,113,561	+				-0.7
4,113,570	+				-0.5
4,113,576	+				-0.2
4,113,576	+				-0.6
4,113,637	+				-1.2
4,113,637	+				+0.2
4,113,637	+				-2.2
4,113,638	-				-0.2
4,113,638	-				-1.0
4,113,707	+		Sama_3481	0.18	-1.5
4,113,707	+		Sama_3481	0.18	-3.1
4,113,716	+		Sama_3481	0.19	-3.9
4,113,716	+		Sama_3481	0.19	-1.6
4,113,737	+		Sama_3481	0.22	-2.1
4,113,737	+		Sama_3481	0.22	-2.1
4,113,737	+		Sama_3481	0.22	-2.4
4,113,737	+		Sama_3481	0.22	-0.6
4,113,770	+		Sama_3481	0.28	-1.6
4,113,771	-		Sama_3481	0.28	-1.1
4,113,791	+		Sama_3481	0.31	-1.9
4,113,847	+		Sama_3481	0.40	-1.2
4,113,847	+		Sama_3481	0.40	-2.3
4,113,847	+		Sama_3481	0.40	-2.3
4,113,847	+		Sama_3481	0.40	-1.9
4,113,847	+		Sama_3481	0.40	-0.2
4,113,847	+		Sama_3481	0.40	-1.6
4,113,847	+		Sama_3481	0.40	-1.0
4,113,900	+		Sama_3481	0.49	-0.9
4,113,900	+		Sama_3481	0.49	-1.2
4,113,901	-		Sama_3481	0.49	-3.8
4,113,901	-		Sama_3481	0.49	-0.5
4,113,901	-		Sama_3481	0.49	+0.3
4,113,903	+		Sama_3481	0.49	-2.1
4,113,903	+		Sama_3481	0.49	-2.9
4,113,903	+		Sama_3481	0.49	-2.8
4,113,904	-		Sama_3481	0.49	-1.8
4,113,904	-		Sama_3481	0.49	-1.3
4,113,968	+		Sama_3481	0.59	-2.0
4,113,968	+		Sama_3481	0.59	-1.9
4,113,968	+		Sama_3481	0.59	-0.2
4,113,968	+		Sama_3481	0.59	-2.2
4,113,968	+		Sama_3481	0.59	-1.4
4,113,969	-		Sama_3481	0.60	+0.1
4,113,979	+		Sama_3481	0.61	-1.4
4,113,979	+		Sama_3481	0.61	-1.0
4,113,979	+		Sama_3481	0.61	-3.3
4,113,979	+		Sama_3481	0.61	-2.4
4,113,979	+		Sama_3481	0.61	-2.1
4,113,979	+		Sama_3481	0.61	-0.9
4,113,979	+		Sama_3481	0.61	-3.8
4,113,979	+		Sama_3481	0.61	-1.4
4,113,979	+		Sama_3481	0.61	-2.0
4,113,979	+		Sama_3481	0.61	-0.4
4,113,979	+		Sama_3481	0.61	-0.2
4,113,979	+		Sama_3481	0.61	-4.2
4,113,979	+		Sama_3481	0.61	+0.4
4,113,979	+		Sama_3481	0.61	-1.0
4,113,980	-		Sama_3481	0.61	+1.0
4,113,980	-		Sama_3481	0.61	+0.4
4,113,980	-		Sama_3481	0.61	+1.4
4,113,983	+		Sama_3481	0.62	-0.8
4,113,983	+		Sama_3481	0.62	-1.4
4,113,983	+		Sama_3481	0.62	-0.0
4,113,983	+		Sama_3481	0.62	-2.5
4,113,983	+		Sama_3481	0.62	-1.6
4,114,075	+		Sama_3481	0.77	-1.3
4,114,075	+		Sama_3481	0.77	+0.5
4,114,107	+		Sama_3481	0.82	-2.6
4,114,107	+		Sama_3481	0.82	-2.1
4,114,107	+		Sama_3481	0.82	-2.6
4,114,107	+		Sama_3481	0.82	-1.5
4,114,107	+		Sama_3481	0.82	-4.0
4,114,108	-		Sama_3481	0.82	-2.5
4,114,108	-		Sama_3481	0.82	-0.4
4,114,108	-		Sama_3481	0.82	-1.4
4,114,108	-		Sama_3481	0.82	-1.0
4,114,108	-		Sama_3481	0.82	-0.2
4,114,111	+		Sama_3481	0.82	-0.8
4,114,111	+		Sama_3481	0.82	-0.2
4,114,111	+		Sama_3481	0.82	+0.4
4,114,111	+		Sama_3481	0.82	-1.1
4,114,111	+		Sama_3481	0.82	-1.2
4,114,111	+		Sama_3481	0.82	-0.5
4,114,111	+		Sama_3481	0.82	+1.4
4,114,111	+		Sama_3481	0.82	-0.2
4,114,111	+		Sama_3481	0.82	-1.5
4,114,139	+		Sama_3481	0.87	-0.4
4,114,196	+				-0.9
4,114,196	+				-1.9
4,114,202	+				+0.4
4,114,203	-				-1.0
4,114,216	+				-1.4
4,114,217	-				-0.7
4,114,234	+				-0.3
4,114,258	-				+0.1
4,114,258	-				-0.2
4,114,258	-				-2.3
4,114,306	+		Sama_3482	0.18	-0.3
4,114,307	-		Sama_3482	0.18	-2.9
4,114,307	-		Sama_3482	0.18	-0.2
4,114,393	-		Sama_3482	0.35	+1.0
4,114,393	-		Sama_3482	0.35	+1.1
4,114,393	-		Sama_3482	0.35	+0.9
4,114,393	-		Sama_3482	0.35	+1.1
4,114,400	-		Sama_3482	0.36	-0.3
4,114,424	-		Sama_3482	0.41	-2.8
4,114,424	-		Sama_3482	0.41	-0.9
4,114,429	+		Sama_3482	0.42	+1.7
4,114,430	-		Sama_3482	0.42	-0.6
4,114,430	-		Sama_3482	0.42	-0.2