Strain Fitness in Shewanella amazonensis SB2B around Sama_2740

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
3,272,801	+				-0.0
3,272,801	+				-1.3
3,272,801	+				+1.0
3,272,801	+				-2.2
3,272,817	-				-0.8
3,272,848	+		Sama_2739	0.11	-1.0
3,272,884	-		Sama_2739	0.15	-1.1
3,272,884	-		Sama_2739	0.15	-2.2
3,272,945	+		Sama_2739	0.21	-0.6
3,272,945	+		Sama_2739	0.21	-0.0
3,272,945	+		Sama_2739	0.21	-2.0
3,272,946	-		Sama_2739	0.21	-1.0
3,272,946	-		Sama_2739	0.21	-0.0
3,272,953	-		Sama_2739	0.22	-1.6
3,273,030	+		Sama_2739	0.30	-0.0
3,273,031	-		Sama_2739	0.30	-0.0
3,273,121	-		Sama_2739	0.39	-1.2
3,273,129	+		Sama_2739	0.40	-0.6
3,273,129	+		Sama_2739	0.40	-1.0
3,273,129	+		Sama_2739	0.40	-0.6
3,273,129	+		Sama_2739	0.40	-1.3
3,273,130	-		Sama_2739	0.40	-1.8
3,273,130	-		Sama_2739	0.40	-0.0
3,273,206	+		Sama_2739	0.48	-0.0
3,273,207	-		Sama_2739	0.48	-0.6
3,273,207	-		Sama_2739	0.48	-1.8
3,273,241	+		Sama_2739	0.52	-1.0
3,273,241	+		Sama_2739	0.52	-2.3
3,273,242	-		Sama_2739	0.52	-1.3
3,273,386	+		Sama_2739	0.67	-1.6
3,273,387	-		Sama_2739	0.67	-2.0
3,273,411	+		Sama_2739	0.69	-1.2
3,273,411	+		Sama_2739	0.69	-2.3
3,273,411	+		Sama_2739	0.69	-2.5
3,273,411	+		Sama_2739	0.69	-1.7
3,273,411	+		Sama_2739	0.69	-1.6
3,273,411	+		Sama_2739	0.69	-1.0
3,273,412	-		Sama_2739	0.70	+0.2
3,273,461	+		Sama_2739	0.75	-0.6
3,273,461	+		Sama_2739	0.75	-2.0
3,273,461	+		Sama_2739	0.75	-2.3
3,273,480	+		Sama_2739	0.77	-2.0
3,273,481	-		Sama_2739	0.77	-0.6
3,273,481	-		Sama_2739	0.77	-0.3
3,273,499	+		Sama_2739	0.79	-1.8
3,273,499	+		Sama_2739	0.79	+1.2
3,273,500	-		Sama_2739	0.79	-0.6
3,273,500	-		Sama_2739	0.79	-2.3
3,273,500	-		Sama_2739	0.79	+0.5
3,273,500	-		Sama_2739	0.79	-1.6
3,273,501	+		Sama_2739	0.79	-1.3
3,273,502	-		Sama_2739	0.79	-2.2
3,273,502	-		Sama_2739	0.79	-1.3
3,273,543	+		Sama_2739	0.83	-2.2
3,273,548	+		Sama_2739	0.84	+0.5
3,273,556	+		Sama_2739	0.84	-2.6
3,273,556	+		Sama_2739	0.84	+2.0
3,273,557	-		Sama_2739	0.85	-0.4
3,273,557	-		Sama_2739	0.85	-0.9
3,273,557	-		Sama_2739	0.85	-1.0
3,273,557	-		Sama_2739	0.85	-1.6
3,273,557	-		Sama_2739	0.85	-2.3
3,273,565	-		Sama_2739	0.85	-2.8
3,273,610	+				-1.6
3,273,611	-				-1.3
3,273,611	-				+0.7
3,273,611	-				-2.0
3,273,611	-				-2.5
3,273,611	-				+0.7
3,273,611	-				-1.3
3,273,611	-				-0.3
3,273,611	-				-0.6
3,273,611	-				-1.7
3,273,687	+				-1.7
3,273,687	+				-0.0
3,273,688	-				+0.9
3,273,688	-				-0.0
3,273,752	+				-0.5
3,273,753	-				+0.8
3,273,760	+				-0.9
3,273,761	-				+1.1
3,273,761	-				-0.7
3,273,761	-				+0.7
3,273,761	-				-0.6
3,273,761	-				+0.5
3,273,767	-				+0.4
3,273,767	-				-0.4
3,273,767	-				+0.8
3,273,810	+				+0.4
3,273,810	+				+0.4
3,273,810	+				-0.4
3,273,811	-				-0.5
3,273,811	-				-0.0
3,273,856	+				-0.7
3,273,857	-				+1.5
3,273,866	+				-0.8
3,273,866	+				-1.5
3,273,867	-				-0.9
3,273,884	+				-0.6
3,273,884	+				+1.0
3,273,884	+				-0.2
3,273,884	+				-1.6
3,273,884	+				+0.2
3,273,884	+				-2.5
3,273,885	-				-0.2
3,273,885	-				-0.5
3,273,976	+		Sama_2740	0.16	-1.4
3,273,977	-		Sama_2740	0.16	+1.7
3,273,977	-		Sama_2740	0.16	+0.1
3,273,977	-		Sama_2740	0.16	-1.8
3,273,986	+		Sama_2740	0.16	+0.8
3,273,987	-		Sama_2740	0.17	-0.0
3,273,987	-		Sama_2740	0.17	+0.6
3,273,987	-		Sama_2740	0.17	+0.4
3,274,008	+		Sama_2740	0.18	+1.0
3,274,009	-		Sama_2740	0.18	+0.3
3,274,043	+		Sama_2740	0.21	-0.3
3,274,043	+		Sama_2740	0.21	-0.2
3,274,043	+		Sama_2740	0.21	+0.3
3,274,044	-		Sama_2740	0.21	-0.5
3,274,044	-		Sama_2740	0.21	-0.5
3,274,044	-		Sama_2740	0.21	+0.1
3,274,044	-		Sama_2740	0.21	-0.8
3,274,047	+		Sama_2740	0.21	-0.8
3,274,047	+		Sama_2740	0.21	+0.0
3,274,048	-		Sama_2740	0.21	+0.2
3,274,048	-		Sama_2740	0.21	+0.2
3,274,048	-		Sama_2740	0.21	-0.8
3,274,048	-		Sama_2740	0.21	+1.2
3,274,055	+		Sama_2740	0.22	+0.8
3,274,056	-		Sama_2740	0.22	-1.1
3,274,083	+		Sama_2740	0.24	-1.0
3,274,123	+		Sama_2740	0.27	-0.2
3,274,127	+		Sama_2740	0.27	+1.1
3,274,127	+		Sama_2740	0.27	-0.2
3,274,127	+		Sama_2740	0.27	-1.0
3,274,130	+		Sama_2740	0.27	-0.6
3,274,131	-		Sama_2740	0.27	-1.3
3,274,131	-		Sama_2740	0.27	+1.2
3,274,258	+		Sama_2740	0.37	+0.2
3,274,337	+		Sama_2740	0.43	+0.4
3,274,337	+		Sama_2740	0.43	-0.2
3,274,338	-		Sama_2740	0.43	+0.4
3,274,338	-		Sama_2740	0.43	-0.4
3,274,339	+		Sama_2740	0.43	-0.6
3,274,340	-		Sama_2740	0.43	-0.4
3,274,340	-		Sama_2740	0.43	-0.1
3,274,340	-		Sama_2740	0.43	-0.0
3,274,428	+		Sama_2740	0.50	-0.2
3,274,429	-		Sama_2740	0.50	-0.8
3,274,429	-		Sama_2740	0.50	-0.0
3,274,429	-		Sama_2740	0.50	+0.4
3,274,448	+		Sama_2740	0.51	+0.2
3,274,449	-		Sama_2740	0.51	-0.0
3,274,472	+		Sama_2740	0.53	-2.6
3,274,472	+		Sama_2740	0.53	-0.8
3,274,472	+		Sama_2740	0.53	+1.7
3,274,473	-		Sama_2740	0.53	-0.0
3,274,473	-		Sama_2740	0.53	+1.6
3,274,473	-		Sama_2740	0.53	-1.0
3,274,486	+		Sama_2740	0.54	-1.2
3,274,486	+		Sama_2740	0.54	-0.0
3,274,486	+		Sama_2740	0.54	-2.2
3,274,487	-		Sama_2740	0.54	-0.2
3,274,487	-		Sama_2740	0.54	-0.8
3,274,487	-		Sama_2740	0.54	-0.3
3,274,487	-		Sama_2740	0.54	+0.6
3,274,487	-		Sama_2740	0.54	+0.1
3,274,487	-		Sama_2740	0.54	-0.9
3,274,508	+		Sama_2740	0.56	+0.7
3,274,509	-		Sama_2740	0.56	-1.0
3,274,509	-		Sama_2740	0.56	-1.0
3,274,509	-		Sama_2740	0.56	-0.9
3,274,509	-		Sama_2740	0.56	-0.5
3,274,525	+		Sama_2740	0.57	+0.8
3,274,525	+		Sama_2740	0.57	-0.1
3,274,525	+		Sama_2740	0.57	+0.2
3,274,569	+		Sama_2740	0.60	-0.8
3,274,569	+		Sama_2740	0.60	-0.2
3,274,570	-		Sama_2740	0.60	-0.5
3,274,596	+		Sama_2740	0.62	-0.2
3,274,597	-		Sama_2740	0.63	-2.0
3,274,597	-		Sama_2740	0.63	-0.2
3,274,597	-		Sama_2740	0.63	-0.3
3,274,597	-		Sama_2740	0.63	+0.1
3,274,617	+		Sama_2740	0.64	+0.4
3,274,617	+		Sama_2740	0.64	+1.0
3,274,618	-		Sama_2740	0.64	-0.9
3,274,618	-		Sama_2740	0.64	+1.3
3,274,622	+		Sama_2740	0.64	-0.7
3,274,623	-		Sama_2740	0.64	-0.3
3,274,644	-		Sama_2740	0.66	-1.3
3,274,691	+		Sama_2740	0.70	+0.2
3,274,692	-		Sama_2740	0.70	+0.6
3,274,697	+		Sama_2740	0.70	+0.6
3,274,697	+		Sama_2740	0.70	-0.4
3,274,697	+		Sama_2740	0.70	-0.7
3,274,698	-		Sama_2740	0.70	-1.0
3,274,698	-		Sama_2740	0.70	-0.2
3,274,707	+		Sama_2740	0.71	-2.2
3,274,707	+		Sama_2740	0.71	+0.1
3,274,707	+		Sama_2740	0.71	-1.0
3,274,707	+		Sama_2740	0.71	+2.6
3,274,707	+		Sama_2740	0.71	-1.0
3,274,707	+		Sama_2740	0.71	-0.2
3,274,707	+		Sama_2740	0.71	-0.1
3,274,707	+		Sama_2740	0.71	+1.7
3,274,708	-		Sama_2740	0.71	-0.3
3,274,708	-		Sama_2740	0.71	+1.0
3,274,708	-		Sama_2740	0.71	+1.9
3,274,721	+		Sama_2740	0.72	+0.1
3,274,721	+		Sama_2740	0.72	-0.3
3,274,722	-		Sama_2740	0.72	+0.7
3,274,722	-		Sama_2740	0.72	+0.9
3,274,722	-		Sama_2740	0.72	-1.8
3,274,738	-		Sama_2740	0.73	-0.1
3,274,831	+		Sama_2740	0.80	+0.9
3,274,831	+		Sama_2740	0.80	-0.7
3,274,831	+		Sama_2740	0.80	-1.0
3,274,831	+		Sama_2740	0.80	-1.3
3,274,831	+		Sama_2740	0.80	-0.4
3,274,832	-		Sama_2740	0.80	+1.0
3,274,832	-		Sama_2740	0.80	-0.3
3,274,832	-		Sama_2740	0.80	+1.0
3,274,832	-		Sama_2740	0.80	+0.1
3,274,832	-		Sama_2740	0.80	-0.2
3,274,854	-		Sama_2740	0.82	-0.1
3,274,874	-		Sama_2740	0.83	-1.2
3,274,874	-		Sama_2740	0.83	-0.3
3,275,007	+				-0.9
3,275,008	-				-1.2
3,275,045	+				-0.1
3,275,045	+				+0.6
3,275,058	+				-0.3
3,275,058	+				+0.2
3,275,058	+				+0.4
3,275,058	+				+0.2
3,275,058	+				-0.6
3,275,058	+				+0.8
3,275,058	+				+1.4
3,275,058	+				+1.0
3,275,058	+				-1.6
3,275,058	+				+1.1
3,275,058	+				+0.5
3,275,059	-				-2.0
3,275,059	-				+0.6
3,275,059	-				-1.5
3,275,059	-				+0.0
3,275,059	-				-0.6
3,275,059	-				-0.1
3,275,059	-				-0.9
3,275,059	-				+0.5
3,275,059	-				-1.1
3,275,108	+				+0.3
3,275,108	+				-0.1
3,275,108	+				+0.7
3,275,108	+				+0.1
3,275,108	+				+0.5
3,275,109	-				-0.0
3,275,112	+				-1.8
3,275,113	-				+0.3
3,275,113	-				+0.7
3,275,134	+				-1.3
3,275,134	+				-1.0
3,275,142	+				-0.6
3,275,142	+				+2.2
3,275,198	+				-0.3
3,275,199	-				-0.3
3,275,215	-				-0.8
3,275,246	+				-0.2
3,275,325	+				-0.2
3,275,328	+				-1.1
3,275,450	+				+0.4
3,275,450	+				-0.1
3,275,451	-				-0.3
3,275,503	+				-0.7
3,275,503	+				+0.7
3,275,515	+				+0.2
3,275,516	-				-2.2
3,275,516	-				+0.2
3,275,516	-				-1.8
3,275,564	+				+0.2
3,275,565	-				+0.1
3,275,594	-				+0.5
3,275,594	-				+1.0
3,275,594	-				+0.8
3,275,804	-		Sama_2741	0.32	-1.6
3,275,804	-		Sama_2741	0.32	-0.3
3,275,861	+		Sama_2741	0.39	+0.3
3,275,867	-		Sama_2741	0.40	+0.1
3,275,867	-		Sama_2741	0.40	+1.0
3,275,929	+		Sama_2741	0.49	+1.6
3,275,929	+		Sama_2741	0.49	+1.4
3,275,929	+		Sama_2741	0.49	+0.2
3,275,929	+		Sama_2741	0.49	+0.6
3,275,929	+		Sama_2741	0.49	-0.1
3,275,930	-		Sama_2741	0.49	-0.9
3,275,930	-		Sama_2741	0.49	-0.3
3,275,930	-		Sama_2741	0.49	-0.2
3,275,936	+		Sama_2741	0.49	+1.0
3,275,936	+		Sama_2741	0.49	+0.2
3,275,937	-		Sama_2741	0.50	-0.8
3,276,019	+		Sama_2741	0.61	-0.1
3,276,020	-		Sama_2741	0.61	+1.0