Strain Fitness in Shewanella amazonensis SB2B around Sama_2706

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
3,237,655	+		Sama_2705	0.56	+1.4
3,237,655	+		Sama_2705	0.56	-0.4
3,237,655	+		Sama_2705	0.56	-0.0
3,237,655	+		Sama_2705	0.56	-1.0
3,237,656	-		Sama_2705	0.56	-0.0
3,237,656	-		Sama_2705	0.56	-1.9
3,237,656	-		Sama_2705	0.56	+0.4
3,237,680	+		Sama_2705	0.57	+2.0
3,237,681	-		Sama_2705	0.57	+1.0
3,237,847	+		Sama_2705	0.65	-0.2
3,237,848	-		Sama_2705	0.66	-0.4
3,237,848	-		Sama_2705	0.66	+1.0
3,237,848	-		Sama_2705	0.66	+1.1
3,237,871	+		Sama_2705	0.67	-1.2
3,237,871	+		Sama_2705	0.67	+0.8
3,237,871	+		Sama_2705	0.67	-0.2
3,237,872	-		Sama_2705	0.67	+0.3
3,237,872	-		Sama_2705	0.67	+1.7
3,237,872	-		Sama_2705	0.67	-1.0
3,237,872	-		Sama_2705	0.67	+1.1
3,237,872	-		Sama_2705	0.67	-0.0
3,237,872	-		Sama_2705	0.67	+0.4
3,237,881	+		Sama_2705	0.67	-1.0
3,237,882	-		Sama_2705	0.67	-0.0
3,237,882	-		Sama_2705	0.67	-0.0
3,237,882	-		Sama_2705	0.67	+0.1
3,237,883	+		Sama_2705	0.67	+0.5
3,237,883	+		Sama_2705	0.67	-1.4
3,237,883	+		Sama_2705	0.67	-0.1
3,237,884	-		Sama_2705	0.67	+0.8
3,237,884	-		Sama_2705	0.67	-0.9
3,237,884	-		Sama_2705	0.67	-1.9
3,237,884	-		Sama_2705	0.67	-0.4
3,237,884	-		Sama_2705	0.67	-0.8
3,237,884	-		Sama_2705	0.67	+0.7
3,237,884	-		Sama_2705	0.67	+0.9
3,237,884	-		Sama_2705	0.67	+0.4
3,237,913	+		Sama_2705	0.69	+0.2
3,237,942	-		Sama_2705	0.70	+1.2
3,237,961	+		Sama_2705	0.71	-0.0
3,237,962	-		Sama_2705	0.71	+0.9
3,238,092	+		Sama_2705	0.78	+0.4
3,238,092	+		Sama_2705	0.78	-0.0
3,238,092	+		Sama_2705	0.78	-1.2
3,238,092	+		Sama_2705	0.78	+0.0
3,238,092	+		Sama_2705	0.78	+1.3
3,238,092	+		Sama_2705	0.78	-1.5
3,238,092	+		Sama_2705	0.78	-0.6
3,238,092	+		Sama_2705	0.78	+1.2
3,238,093	-		Sama_2705	0.78	+0.5
3,238,093	-		Sama_2705	0.78	-2.2
3,238,093	-		Sama_2705	0.78	-1.6
3,238,093	-		Sama_2705	0.78	+1.0
3,238,093	-		Sama_2705	0.78	+0.1
3,238,114	+		Sama_2705	0.79	-0.5
3,238,115	-		Sama_2705	0.79	+0.1
3,238,115	-		Sama_2705	0.79	+0.5
3,238,119	+		Sama_2705	0.79	-0.3
3,238,120	-		Sama_2705	0.79	+1.2
3,238,150	+		Sama_2705	0.81	+0.1
3,238,178	-		Sama_2705	0.82	+0.7
3,238,183	+		Sama_2705	0.83	+0.5
3,238,194	+		Sama_2705	0.83	+1.2
3,238,194	+		Sama_2705	0.83	-0.4
3,238,194	+		Sama_2705	0.83	-1.0
3,238,194	+		Sama_2705	0.83	-0.9
3,238,194	+		Sama_2705	0.83	-0.2
3,238,194	+		Sama_2705	0.83	+0.5
3,238,202	-		Sama_2705	0.84	+0.7
3,238,202	-		Sama_2705	0.84	+1.8
3,238,227	-		Sama_2705	0.85	-0.0
3,238,276	+		Sama_2705	0.87	+0.7
3,238,334	+				+0.6
3,238,401	+				+1.8
3,238,401	+				-0.0
3,238,402	-				+0.7
3,238,402	-				-0.4
3,238,402	-				-0.4
3,238,402	-				-1.6
3,238,402	-				-1.6
3,238,402	-				+0.5
3,238,402	-				-0.5
3,238,402	-				-0.2
3,238,420	-				+0.3
3,238,489	+				+0.5
3,238,490	-				+1.0
3,238,490	-				-1.0
3,238,513	+				+0.1
3,238,513	+				+0.3
3,238,513	+				+1.0
3,238,513	+				+0.2
3,238,571	+				-0.4
3,238,608	+		Sama_2706	0.11	-0.9
3,238,608	+		Sama_2706	0.11	-1.0
3,238,608	+		Sama_2706	0.11	+1.0
3,238,608	+		Sama_2706	0.11	+0.2
3,238,609	-		Sama_2706	0.12	+0.5
3,238,609	-		Sama_2706	0.12	+0.5
3,238,609	-		Sama_2706	0.12	+3.5
3,238,609	-		Sama_2706	0.12	+0.6
3,238,609	-		Sama_2706	0.12	-1.6
3,238,778	+		Sama_2706	0.51	+1.3
3,238,778	+		Sama_2706	0.51	-0.5
3,238,779	-		Sama_2706	0.51	+0.2
3,238,830	-		Sama_2706	0.63	-0.1
3,238,834	+		Sama_2706	0.64	+0.5
3,238,834	+		Sama_2706	0.64	-0.4
3,238,835	-		Sama_2706	0.64	-0.2
3,238,835	-		Sama_2706	0.64	-0.0
3,238,860	-		Sama_2706	0.70	+0.7
3,238,896	+		Sama_2706	0.78	+0.5
3,238,896	+		Sama_2706	0.78	+1.2
3,238,896	+		Sama_2706	0.78	-1.0
3,238,897	-		Sama_2706	0.78	+1.4
3,238,897	-		Sama_2706	0.78	+1.5
3,238,897	-		Sama_2706	0.78	+1.0
3,238,897	-		Sama_2706	0.78	+0.2
3,238,897	-		Sama_2706	0.78	-0.6
3,238,919	-		Sama_2706	0.83	+1.0
3,238,974	-				+0.9
3,238,974	-				+0.5
3,238,974	-				-1.2
3,238,974	-				-0.8
3,238,977	+				+0.2
3,238,977	+				-0.6
3,238,977	+				-0.0
3,238,978	-				+0.1
3,238,978	-				+0.4
3,238,990	+				-0.5
3,238,990	+				+0.4
3,238,990	+				+0.7
3,238,991	-				-0.3
3,238,991	-				+0.1
3,238,991	-				+0.1
3,238,991	-				-0.9
3,238,991	-				-1.2
3,239,002	+				-0.9
3,239,002	+				+0.8
3,239,002	+				+1.1
3,239,003	-				+1.1
3,239,003	-				-0.7
3,239,003	-				+0.4
3,239,011	+				-0.4
3,239,012	-				+1.2
3,239,012	-				+1.7
3,239,012	-				-0.1
3,239,012	-				+0.5
3,239,018	-				+1.0
3,239,018	-				-0.0
3,239,054	+				-0.0
3,239,061	+				-0.6
3,239,062	-				-0.1
3,239,062	-				+0.1
3,239,062	-				-0.8
3,239,071	+				+0.1
3,239,072	-				+2.0
3,239,143	+				+1.0
3,239,143	+				+0.4
3,239,143	+				+0.5
3,239,143	+				-1.5
3,239,143	+				-0.6
3,239,144	-				+0.5
3,239,151	-				-0.9
3,239,266	+				-0.3
3,239,266	+				+1.4
3,239,266	+				+1.6
3,239,266	+				-0.6
3,239,266	+				-0.9
3,239,266	+				+0.2
3,239,266	+				-0.1
3,239,266	+				-0.5
3,239,266	+				+1.3
3,239,266	+				+0.2
3,239,266	+				+0.2
3,239,266	+				-1.4
3,239,266	+				-0.6
3,239,266	+				-0.2
3,239,266	+				+0.2
3,239,267	-				-0.0
3,239,267	-				-0.4
3,239,267	-				+1.0
3,239,267	-				-0.6
3,239,267	-				-0.5
3,239,267	-				-1.4
3,239,267	-				+0.1
3,239,267	-				-1.6
3,239,267	-				-1.6
3,239,267	-				-1.0
3,239,267	-				-0.9
3,239,267	-				-2.5
3,239,267	-				-0.3
3,239,267	-				+0.8
3,239,267	-				+0.8
3,239,422	+		Sama_2707	0.10	+1.2
3,239,423	-		Sama_2707	0.11	-0.2
3,239,430	+		Sama_2707	0.12	-0.8
3,239,430	+		Sama_2707	0.12	-1.2
3,239,431	-		Sama_2707	0.13	+1.0
3,239,431	-		Sama_2707	0.13	+0.2
3,239,453	+		Sama_2707	0.18	-0.5
3,239,464	+		Sama_2707	0.20	+0.1
3,239,465	-		Sama_2707	0.21	+0.2
3,239,465	-		Sama_2707	0.21	-1.4
3,239,465	-		Sama_2707	0.21	-0.4
3,239,474	-		Sama_2707	0.23	+0.6
3,239,496	+		Sama_2707	0.28	-1.5
3,239,496	+		Sama_2707	0.28	-0.8
3,239,497	-		Sama_2707	0.28	-0.5
3,239,497	-		Sama_2707	0.28	+0.3
3,239,525	+		Sama_2707	0.35	-1.0
3,239,525	+		Sama_2707	0.35	-1.0
3,239,595	+		Sama_2707	0.52	+3.0
3,239,596	-		Sama_2707	0.52	+0.4
3,239,596	-		Sama_2707	0.52	+0.0
3,239,596	-		Sama_2707	0.52	+0.4
3,239,596	-		Sama_2707	0.52	-1.0
3,239,596	-		Sama_2707	0.52	+0.4
3,239,596	-		Sama_2707	0.52	+0.5
3,239,598	+		Sama_2707	0.52	-0.8
3,239,598	+		Sama_2707	0.52	+0.2
3,239,599	-		Sama_2707	0.53	-0.5
3,239,694	+		Sama_2707	0.75	-0.0
3,239,694	+		Sama_2707	0.75	+0.8
3,239,694	+		Sama_2707	0.75	-0.6
3,239,695	-		Sama_2707	0.75	-0.0
3,239,720	+		Sama_2707	0.81	+0.8
3,239,721	-		Sama_2707	0.82	-1.3
3,239,721	-		Sama_2707	0.82	+0.2
3,239,843	-				+0.2
3,239,898	+				+0.7
3,239,899	-				-1.0
3,239,899	-				-0.2
3,239,899	-				-1.0
3,239,899	-				-0.0
3,239,899	-				+0.7
3,239,899	-				-1.6
3,239,918	+				-1.2
3,239,918	+				+0.6
3,239,918	+				-1.5
3,239,918	+				-0.6
3,239,918	+				+0.1
3,239,918	+				+0.4
3,239,918	+				+1.1
3,239,918	+				+0.0
3,239,919	-				+0.3
3,239,919	-				+0.4
3,239,919	-				-0.5
3,239,919	-				-0.0
3,239,919	-				+1.3
3,239,963	+				-0.9
3,239,964	-				+0.7