Strain Fitness in Shewanella amazonensis SB2B around Sama_0942

Experiment: NAG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG
1,138,238	+				-1.0
1,138,239	-				-0.2
1,138,239	-				+1.1
1,138,294	+				-0.0
1,138,294	+				-0.3
1,138,317	+				+2.0
1,138,318	-				+0.5
1,138,318	-				-0.6
1,138,388	-				-1.4
1,138,452	+				+0.3
1,138,453	-		Sama_0941	0.10	-1.4
1,138,458	+		Sama_0941	0.11	+0.8
1,138,458	+		Sama_0941	0.11	-0.4
1,138,459	-		Sama_0941	0.11	+0.5
1,138,492	-		Sama_0941	0.15	+0.3
1,138,492	-		Sama_0941	0.15	-2.5
1,138,492	-		Sama_0941	0.15	+0.2
1,138,522	+		Sama_0941	0.18	+0.9
1,138,522	+		Sama_0941	0.18	-0.4
1,138,522	+		Sama_0941	0.18	+0.4
1,138,522	+		Sama_0941	0.18	-1.4
1,138,522	+		Sama_0941	0.18	-0.6
1,138,523	-		Sama_0941	0.18	-2.1
1,138,523	-		Sama_0941	0.18	+0.6
1,138,523	-		Sama_0941	0.18	+0.5
1,138,523	-		Sama_0941	0.18	-1.2
1,138,538	+		Sama_0941	0.20	-0.2
1,138,538	+		Sama_0941	0.20	+1.1
1,138,539	-		Sama_0941	0.20	-0.1
1,138,539	-		Sama_0941	0.20	-1.4
1,138,539	-		Sama_0941	0.20	+1.1
1,138,539	-		Sama_0941	0.20	-0.6
1,138,539	-		Sama_0941	0.20	+0.1
1,138,640	+		Sama_0941	0.32	-1.0
1,138,641	-		Sama_0941	0.32	-0.4
1,138,689	+		Sama_0941	0.37	+0.5
1,138,689	+		Sama_0941	0.37	-0.4
1,138,689	+		Sama_0941	0.37	-0.0
1,138,689	+		Sama_0941	0.37	-1.6
1,138,729	-		Sama_0941	0.42	+0.4
1,138,789	-		Sama_0941	0.49	+1.1
1,138,821	+		Sama_0941	0.53	+0.1
1,138,828	+		Sama_0941	0.53	-0.8
1,138,829	-		Sama_0941	0.54	-0.0
1,138,876	+		Sama_0941	0.59	-0.2
1,138,958	+		Sama_0941	0.69	-0.3
1,138,958	+		Sama_0941	0.69	+0.5
1,138,958	+		Sama_0941	0.69	+0.2
1,138,959	-		Sama_0941	0.69	-1.4
1,138,959	-		Sama_0941	0.69	-1.0
1,138,959	-		Sama_0941	0.69	+1.2
1,138,959	-		Sama_0941	0.69	-2.2
1,138,966	+		Sama_0941	0.69	+0.1
1,138,967	-		Sama_0941	0.70	-0.8
1,138,981	+		Sama_0941	0.71	+0.0
1,138,981	+		Sama_0941	0.71	+0.1
1,138,981	+		Sama_0941	0.71	-0.3
1,138,982	-		Sama_0941	0.71	+0.5
1,138,982	-		Sama_0941	0.71	+0.8
1,139,024	+		Sama_0941	0.76	-0.7
1,139,036	+		Sama_0941	0.78	+2.1
1,139,036	+		Sama_0941	0.78	-0.2
1,139,089	-		Sama_0941	0.84	-0.1
1,139,089	-		Sama_0941	0.84	-0.7
1,139,105	-		Sama_0941	0.86	-0.0
1,139,105	-		Sama_0941	0.86	+0.2
1,139,109	+		Sama_0941	0.86	+0.8
1,139,109	+		Sama_0941	0.86	-0.5
1,139,109	+		Sama_0941	0.86	+0.3
1,139,110	-		Sama_0941	0.86	+0.7
1,139,110	-		Sama_0941	0.86	+0.2
1,139,111	+		Sama_0941	0.86	+0.1
1,139,111	+		Sama_0941	0.86	-0.5
1,139,111	+		Sama_0941	0.86	+0.4
1,139,111	+		Sama_0941	0.86	-0.6
1,139,148	+				+0.8
1,139,148	+				-0.4
1,139,148	+				-0.3
1,139,149	-				+3.0
1,139,177	+				-0.6
1,139,192	+				-1.7
1,139,193	-				+0.1
1,139,211	+				-1.4
1,139,211	+				-0.3
1,139,231	+				+0.3
1,139,232	-				-0.7
1,139,234	+				-0.2
1,139,234	+				+0.7
1,139,234	+				+1.1
1,139,234	+				-1.8
1,139,246	+				-0.1
1,139,246	+				+1.0
1,139,246	+				+1.6
1,139,247	-				-0.8
1,139,405	+		Sama_0942	0.12	+0.6
1,139,405	+		Sama_0942	0.12	+0.3
1,139,405	+		Sama_0942	0.12	-0.3
1,139,406	-		Sama_0942	0.12	+1.2
1,139,410	-		Sama_0942	0.12	+0.7
1,139,425	+		Sama_0942	0.13	+1.3
1,139,425	+		Sama_0942	0.13	+1.3
1,139,558	+		Sama_0942	0.22	-0.3
1,139,559	-		Sama_0942	0.22	-1.5
1,139,559	-		Sama_0942	0.22	+2.0
1,139,565	-		Sama_0942	0.23	+1.0
1,139,606	+		Sama_0942	0.26	+0.3
1,139,607	-		Sama_0942	0.26	+0.7
1,139,687	+		Sama_0942	0.31	-0.8
1,139,688	-		Sama_0942	0.31	+1.0
1,139,688	-		Sama_0942	0.31	+1.2
1,139,705	+		Sama_0942	0.32	+1.9
1,139,705	+		Sama_0942	0.32	+0.7
1,139,705	+		Sama_0942	0.32	+1.0
1,139,706	-		Sama_0942	0.32	+1.0
1,139,706	-		Sama_0942	0.32	-0.6
1,139,706	-		Sama_0942	0.32	-1.6
1,139,706	-		Sama_0942	0.32	-2.5
1,139,706	-		Sama_0942	0.32	+0.4
1,139,727	-		Sama_0942	0.34	-1.8
1,139,764	+		Sama_0942	0.36	-1.0
1,139,764	+		Sama_0942	0.36	+0.8
1,139,764	+		Sama_0942	0.36	-0.1
1,139,764	+		Sama_0942	0.36	-0.0
1,139,765	-		Sama_0942	0.36	+2.1
1,139,765	-		Sama_0942	0.36	+1.8
1,139,852	+		Sama_0942	0.42	-0.2
1,139,876	-		Sama_0942	0.44	-1.0
1,139,948	+		Sama_0942	0.49	-0.8
1,139,948	+		Sama_0942	0.49	-0.6
1,140,038	+		Sama_0942	0.55	-0.3
1,140,039	-		Sama_0942	0.55	+0.8
1,140,039	-		Sama_0942	0.55	-0.4
1,140,051	-		Sama_0942	0.55	-1.4
1,140,051	-		Sama_0942	0.55	-0.2
1,140,163	+		Sama_0942	0.63	-0.5
1,140,164	-		Sama_0942	0.63	-2.0
1,140,166	-		Sama_0942	0.63	-1.4
1,140,170	-		Sama_0942	0.63	-1.6
1,140,211	+		Sama_0942	0.66	-0.0
1,140,212	-		Sama_0942	0.66	+1.2
1,140,212	-		Sama_0942	0.66	+0.9
1,140,221	+		Sama_0942	0.67	-0.0
1,140,414	-		Sama_0942	0.80	-0.2
1,140,446	+		Sama_0942	0.82	+0.5
1,140,447	-		Sama_0942	0.82	-1.0
1,140,447	-		Sama_0942	0.82	-0.2
1,140,513	-		Sama_0942	0.86	-0.3
1,140,528	-		Sama_0942	0.88	+0.6
1,140,694	+				-0.0
1,140,695	-				-0.0
1,140,852	-				-0.8
1,140,898	+				+0.4
1,140,899	-				+0.4
1,140,908	+				+0.5
1,140,909	-				-0.7
1,141,021	+		Sama_0943	0.10	+0.4
1,141,021	+		Sama_0943	0.10	-0.9
1,141,022	-		Sama_0943	0.10	-0.2
1,141,022	-		Sama_0943	0.10	+0.3
1,141,024	+		Sama_0943	0.11	+0.5
1,141,024	+		Sama_0943	0.11	+1.2
1,141,025	-		Sama_0943	0.11	+2.3
1,141,083	+		Sama_0943	0.13	-0.1
1,141,084	-		Sama_0943	0.13	+0.8
1,141,084	-		Sama_0943	0.13	+0.6
1,141,207	+		Sama_0943	0.17	+0.7
1,141,207	+		Sama_0943	0.17	+0.3
1,141,207	+		Sama_0943	0.17	+1.1
1,141,207	+		Sama_0943	0.17	-0.3
1,141,207	+		Sama_0943	0.17	+1.4
1,141,207	+		Sama_0943	0.17	+0.5
1,141,208	-		Sama_0943	0.17	+0.4
1,141,208	-		Sama_0943	0.17	+2.4
1,141,208	-		Sama_0943	0.17	-0.9
1,141,208	-		Sama_0943	0.17	-0.6
1,141,208	-		Sama_0943	0.17	+0.2
1,141,210	+		Sama_0943	0.18	+0.8
1,141,210	+		Sama_0943	0.18	-0.6
1,141,210	+		Sama_0943	0.18	-2.0
1,141,210	+		Sama_0943	0.18	+1.0
1,141,210	+		Sama_0943	0.18	+0.3
1,141,210	+		Sama_0943	0.18	+0.1
1,141,211	-		Sama_0943	0.18	+0.5
1,141,211	-		Sama_0943	0.18	-1.2
1,141,211	-		Sama_0943	0.18	+1.0
1,141,211	-		Sama_0943	0.18	+0.7
1,141,211	-		Sama_0943	0.18	+0.5
1,141,215	+		Sama_0943	0.18	-0.6
1,141,215	+		Sama_0943	0.18	+1.0
1,141,216	-		Sama_0943	0.18	-0.2
1,141,216	-		Sama_0943	0.18	+0.2
1,141,230	+		Sama_0943	0.18	+0.1
1,141,230	+		Sama_0943	0.18	+0.4
1,141,230	+		Sama_0943	0.18	+0.1
1,141,241	+		Sama_0943	0.19	+0.6
1,141,242	-		Sama_0943	0.19	-0.0
1,141,242	-		Sama_0943	0.19	-2.0
1,141,252	-		Sama_0943	0.19	-0.2
1,141,252	-		Sama_0943	0.19	+1.5
1,141,297	+		Sama_0943	0.21	+1.0
1,141,298	-		Sama_0943	0.21	-0.0
1,141,298	-		Sama_0943	0.21	+0.0
1,141,330	+		Sama_0943	0.22	-2.0
1,141,330	+		Sama_0943	0.22	+1.0
1,141,331	-		Sama_0943	0.22	+0.5
1,141,331	-		Sama_0943	0.22	+0.5
1,141,403	+		Sama_0943	0.25	+0.5
1,141,404	-		Sama_0943	0.25	-0.4
1,141,404	-		Sama_0943	0.25	+0.1
1,141,434	-		Sama_0943	0.26	+0.9
1,141,434	-		Sama_0943	0.26	+0.6
1,141,498	-		Sama_0943	0.28	-0.9
1,141,573	-		Sama_0943	0.31	+2.0
1,141,603	-		Sama_0943	0.32	+0.4
1,141,603	-		Sama_0943	0.32	-0.1
1,141,611	-		Sama_0943	0.33	-2.0
1,141,640	-		Sama_0943	0.34	-0.2
1,141,651	-		Sama_0943	0.34	+0.1
1,141,651	-		Sama_0943	0.34	+1.1
1,141,675	-		Sama_0943	0.35	+1.0
1,141,702	+		Sama_0943	0.36	-0.3