Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0617 and Shew_0618 are separated by 24 nucleotides Shew_0618 and Shew_0619 are separated by 253 nucleotides Shew_0619 and Shew_0620 are separated by 58 nucleotides Shew_0620 and Shew_0621 are separated by 80 nucleotides
Shew_0617: Shew_0617 - phosphate transporter (RefSeq), at 701,995 to 703,263
_0617
Shew_0618: Shew_0618 - hypothetical protein (RefSeq), at 703,288 to 703,968
_0618
Shew_0619: Shew_0619 - adenylate cyclase (RefSeq), at 704,222 to 705,709
_0619
Shew_0620: Shew_0620 - ion transport 2 domain-containing protein (RefSeq), at 705,768 to 706,562
_0620
Shew_0621: Shew_0621 - hypothetical protein (RefSeq), at 706,643 to 706,975
_0621
Position (kb) 704
705
706 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 703.311 kb on - strand at 703.420 kb on - strand, within Shew_0618 at 703.524 kb on - strand, within Shew_0618 at 703.888 kb on + strand, within Shew_0618 at 704.030 kb on - strand at 704.030 kb on - strand at 704.273 kb on + strand at 704.295 kb on - strand at 704.303 kb on - strand at 704.373 kb on - strand, within Shew_0619 at 704.680 kb on + strand, within Shew_0619 at 704.883 kb on + strand, within Shew_0619 at 705.084 kb on + strand, within Shew_0619 at 705.136 kb on + strand, within Shew_0619 at 705.240 kb on + strand, within Shew_0619 at 705.300 kb on - strand, within Shew_0619 at 705.327 kb on - strand, within Shew_0619 at 705.328 kb on - strand, within Shew_0619 at 705.520 kb on + strand, within Shew_0619 at 706.222 kb on - strand, within Shew_0620
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 703,311 - +2.7 703,420 - Shew_0618 0.19 +6.6 703,524 - Shew_0618 0.35 +6.1 703,888 + Shew_0618 0.88 +2.0 704,030 - +5.7 704,030 - +4.9 704,273 + +0.9 704,295 - -0.3 704,303 - +0.9 704,373 - Shew_0619 0.10 -0.2 704,680 + Shew_0619 0.31 -0.8 704,883 + Shew_0619 0.44 -0.6 705,084 + Shew_0619 0.58 -0.0 705,136 + Shew_0619 0.61 +0.0 705,240 + Shew_0619 0.68 -0.9 705,300 - Shew_0619 0.72 -1.1 705,327 - Shew_0619 0.74 +0.1 705,328 - Shew_0619 0.74 +1.6 705,520 + Shew_0619 0.87 -0.3 706,222 - Shew_0620 0.57 +0.5
Or see this region's nucleotide sequence