Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0086 and moaA are separated by 315 nucleotides moaA and Shew_0088 are separated by 111 nucleotides Shew_0088 and moaC overlap by 8 nucleotides
Shew_0086: Shew_0086 - electron-transferring-flavoproteindehydrogenase (RefSeq), at 99,591 to 101,240
_0086
Shew_0087: moaA - molybdenum cofactor biosynthesis protein A (RefSeq), at 101,556 to 102,569
moaA
Shew_0088: Shew_0088 - molybdenum cofactor biosynthesis protein B (RefSeq), at 102,681 to 103,211
_0088
Shew_0089: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 103,204 to 103,680
moaC
Position (kb) 101
102
103 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 100.729 kb on - strand, within Shew_0086 at 100.740 kb on - strand, within Shew_0086 at 100.846 kb on + strand, within Shew_0086 at 100.972 kb on - strand, within Shew_0086 at 101.020 kb on - strand, within Shew_0086 at 101.178 kb on + strand at 101.564 kb on + strand at 101.755 kb on + strand, within moaA at 101.864 kb on - strand, within moaA at 101.956 kb on + strand, within moaA at 101.956 kb on + strand, within moaA at 101.956 kb on + strand, within moaA at 101.964 kb on - strand, within moaA at 101.964 kb on - strand, within moaA at 102.046 kb on - strand, within moaA at 102.118 kb on + strand, within moaA at 102.126 kb on - strand, within moaA at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.476 kb on + strand at 102.488 kb on + strand at 102.609 kb on + strand at 102.658 kb on + strand at 102.685 kb on - strand at 102.726 kb on + strand at 102.737 kb on + strand, within Shew_0088 at 102.753 kb on - strand, within Shew_0088 at 103.015 kb on + strand, within Shew_0088 at 103.023 kb on - strand, within Shew_0088 at 103.038 kb on + strand, within Shew_0088 at 103.143 kb on + strand, within Shew_0088 at 103.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 100,729 - Shew_0086 0.69 +1.8 100,740 - Shew_0086 0.70 +3.2 100,846 + Shew_0086 0.76 +3.3 100,972 - Shew_0086 0.84 +2.6 101,020 - Shew_0086 0.87 +3.9 101,178 + +4.0 101,564 + -1.2 101,755 + moaA Shew_0087 0.20 -2.3 101,864 - moaA Shew_0087 0.30 -0.7 101,956 + moaA Shew_0087 0.39 -0.3 101,956 + moaA Shew_0087 0.39 -1.4 101,956 + moaA Shew_0087 0.39 +0.2 101,964 - moaA Shew_0087 0.40 -1.1 101,964 - moaA Shew_0087 0.40 +0.2 102,046 - moaA Shew_0087 0.48 -3.3 102,118 + moaA Shew_0087 0.55 -1.3 102,126 - moaA Shew_0087 0.56 -0.3 102,445 + moaA Shew_0087 0.88 -2.1 102,445 + moaA Shew_0087 0.88 -0.6 102,445 + moaA Shew_0087 0.88 -0.8 102,453 - moaA Shew_0087 0.88 -0.6 102,453 - moaA Shew_0087 0.88 -0.2 102,453 - moaA Shew_0087 0.88 +0.5 102,453 - moaA Shew_0087 0.88 -0.5 102,476 + -2.4 102,488 + +1.0 102,609 + -0.4 102,658 + -0.8 102,685 - +0.8 102,726 + +1.6 102,737 + Shew_0088 0.11 +3.0 102,753 - Shew_0088 0.14 -0.3 103,015 + Shew_0088 0.63 -0.5 103,023 - Shew_0088 0.64 -0.7 103,038 + Shew_0088 0.67 +0.8 103,143 + Shew_0088 0.87 +0.2 103,172 - -2.8
Or see this region's nucleotide sequence