Strain Fitness in Marinobacter adhaerens HP15 around HP15_3284

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3282 and HP15_3283 overlap by 4 nucleotidesHP15_3283 and HP15_3284 are separated by 25 nucleotidesHP15_3284 and HP15_3285 overlap by 4 nucleotides HP15_3282: HP15_3282 - aminoglycoside phosphotransferase, at 3,440,920 to 3,441,978 _3282 HP15_3283: HP15_3283 - nucleotidyltransferase family protein, at 3,441,975 to 3,442,673 _3283 HP15_3284: HP15_3284 - DnaJ-like membrane chaperone protein, at 3,442,699 to 3,443,421 _3284 HP15_3285: HP15_3285 - conserved hypothetical protein, secreted, at 3,443,418 to 3,444,374 _3285 Position (kb) 3442 3443 3444Strain fitness (log2 ratio) -1 0 1 2at 3441.700 kb on + strand, within HP15_3282at 3441.747 kb on + strand, within HP15_3282at 3442.750 kb on - strandat 3442.881 kb on + strand, within HP15_3284at 3442.881 kb on + strand, within HP15_3284at 3442.889 kb on - strand, within HP15_3284at 3443.055 kb on + strand, within HP15_3284at 3443.056 kb on - strand, within HP15_3284at 3443.076 kb on + strand, within HP15_3284at 3443.167 kb on + strand, within HP15_3284at 3443.174 kb on - strand, within HP15_3284at 3443.320 kb on + strand, within HP15_3284at 3443.339 kb on + strand, within HP15_3284at 3443.521 kb on - strand, within HP15_3285at 3443.598 kb on - strand, within HP15_3285at 3443.664 kb on - strand, within HP15_3285at 3443.674 kb on + strand, within HP15_3285at 3443.677 kb on - strand, within HP15_3285at 3443.679 kb on + strand, within HP15_3285at 3443.679 kb on + strand, within HP15_3285at 3443.679 kb on + strand, within HP15_3285at 3443.682 kb on - strand, within HP15_3285at 3443.687 kb on - strand, within HP15_3285at 3443.687 kb on - strand, within HP15_3285at 3443.687 kb on - strand, within HP15_3285at 3443.736 kb on - strand, within HP15_3285at 3443.824 kb on - strand, within HP15_3285at 3443.870 kb on - strand, within HP15_3285at 3443.888 kb on - strand, within HP15_3285at 3443.898 kb on - strand, within HP15_3285at 3443.913 kb on + strand, within HP15_3285at 3443.929 kb on + strand, within HP15_3285at 3444.009 kb on - strand, within HP15_3285at 3444.057 kb on + strand, within HP15_3285at 3444.134 kb on - strand, within HP15_3285at 3444.144 kb on - strand, within HP15_3285at 3444.144 kb on - strand, within HP15_3285at 3444.154 kb on - strand, within HP15_3285at 3444.211 kb on + strand, within HP15_3285at 3444.211 kb on + strand, within HP15_3285at 3444.219 kb on - strand, within HP15_3285at 3444.219 kb on - strand, within HP15_3285at 3444.221 kb on + strand, within HP15_3285at 3444.289 kb on - strandat 3444.289 kb on - strandat 3444.313 kb on - strandat 3444.318 kb on - strandat 3444.323 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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3,441,700 + HP15_3282 0.74 +0.9
3,441,747 + HP15_3282 0.78 -0.6
3,442,750 - +0.3
3,442,881 + HP15_3284 0.25 +1.9
3,442,881 + HP15_3284 0.25 +1.7
3,442,889 - HP15_3284 0.26 -0.0
3,443,055 + HP15_3284 0.49 -0.4
3,443,056 - HP15_3284 0.49 +2.2
3,443,076 + HP15_3284 0.52 +1.1
3,443,167 + HP15_3284 0.65 -0.7
3,443,174 - HP15_3284 0.66 +2.5
3,443,320 + HP15_3284 0.86 -0.4
3,443,339 + HP15_3284 0.89 -0.3
3,443,521 - HP15_3285 0.11 +1.0
3,443,598 - HP15_3285 0.19 -0.1
3,443,664 - HP15_3285 0.26 -0.3
3,443,674 + HP15_3285 0.27 -0.4
3,443,677 - HP15_3285 0.27 -1.1
3,443,679 + HP15_3285 0.27 +1.9
3,443,679 + HP15_3285 0.27 +0.5
3,443,679 + HP15_3285 0.27 +2.3
3,443,682 - HP15_3285 0.28 +0.6
3,443,687 - HP15_3285 0.28 +2.1
3,443,687 - HP15_3285 0.28 +1.3
3,443,687 - HP15_3285 0.28 +0.2
3,443,736 - HP15_3285 0.33 +2.4
3,443,824 - HP15_3285 0.42 +0.2
3,443,870 - HP15_3285 0.47 -0.4
3,443,888 - HP15_3285 0.49 +0.2
3,443,898 - HP15_3285 0.50 -0.6
3,443,913 + HP15_3285 0.52 +2.5
3,443,929 + HP15_3285 0.53 +0.3
3,444,009 - HP15_3285 0.62 -0.3
3,444,057 + HP15_3285 0.67 +1.0
3,444,134 - HP15_3285 0.75 -0.4
3,444,144 - HP15_3285 0.76 +1.0
3,444,144 - HP15_3285 0.76 -0.8
3,444,154 - HP15_3285 0.77 +2.0
3,444,211 + HP15_3285 0.83 +2.2
3,444,211 + HP15_3285 0.83 +0.8
3,444,219 - HP15_3285 0.84 -0.2
3,444,219 - HP15_3285 0.84 -0.2
3,444,221 + HP15_3285 0.84 +0.3
3,444,289 - -0.1
3,444,289 - +2.2
3,444,313 - +1.6
3,444,318 - +2.1
3,444,323 - -0.6

Or see this region's nucleotide sequence