Strain Fitness in Marinobacter adhaerens HP15 around HP15_2935

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2934 and HP15_2935 are separated by 8 nucleotidesHP15_2935 and HP15_2936 overlap by 4 nucleotides HP15_2934: HP15_2934 - protein YeaH, at 3,075,217 to 3,076,506 _2934 HP15_2935: HP15_2935 - SpoVR family protein, at 3,076,515 to 3,078,062 _2935 HP15_2936: HP15_2936 - periplasmic sensor signal transduction histidine kinase, at 3,078,059 to 3,079,396 _2936 Position (kb) 3076 3077 3078 3079Strain fitness (log2 ratio) -1 0 1 2at 3075.517 kb on - strand, within HP15_2934at 3075.520 kb on + strand, within HP15_2934at 3075.547 kb on - strand, within HP15_2934at 3075.605 kb on + strand, within HP15_2934at 3075.710 kb on - strand, within HP15_2934at 3075.774 kb on + strand, within HP15_2934at 3075.850 kb on - strand, within HP15_2934at 3076.124 kb on - strand, within HP15_2934at 3076.177 kb on + strand, within HP15_2934at 3076.216 kb on - strand, within HP15_2934at 3076.304 kb on + strand, within HP15_2934at 3076.336 kb on + strand, within HP15_2934at 3076.689 kb on - strand, within HP15_2935at 3076.822 kb on + strand, within HP15_2935at 3076.822 kb on + strand, within HP15_2935at 3076.822 kb on + strand, within HP15_2935at 3076.822 kb on + strand, within HP15_2935at 3076.861 kb on - strand, within HP15_2935at 3076.916 kb on + strand, within HP15_2935at 3077.222 kb on + strand, within HP15_2935at 3077.233 kb on + strand, within HP15_2935at 3077.241 kb on - strand, within HP15_2935at 3077.496 kb on + strand, within HP15_2935at 3077.496 kb on + strand, within HP15_2935at 3077.735 kb on + strand, within HP15_2935at 3077.754 kb on + strand, within HP15_2935at 3077.787 kb on - strand, within HP15_2935at 3077.990 kb on - strandat 3077.996 kb on - strandat 3078.082 kb on + strandat 3078.201 kb on + strand, within HP15_2936at 3078.272 kb on + strand, within HP15_2936at 3078.428 kb on - strand, within HP15_2936at 3078.557 kb on + strand, within HP15_2936at 3078.873 kb on - strand, within HP15_2936at 3078.873 kb on - strand, within HP15_2936at 3079.023 kb on - strand, within HP15_2936at 3079.045 kb on + strand, within HP15_2936

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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3,075,517 - HP15_2934 0.23 -0.4
3,075,520 + HP15_2934 0.23 -0.6
3,075,547 - HP15_2934 0.26 +2.2
3,075,605 + HP15_2934 0.30 -0.4
3,075,710 - HP15_2934 0.38 +0.9
3,075,774 + HP15_2934 0.43 -0.8
3,075,850 - HP15_2934 0.49 -0.0
3,076,124 - HP15_2934 0.70 +1.9
3,076,177 + HP15_2934 0.74 -1.2
3,076,216 - HP15_2934 0.77 +2.1
3,076,304 + HP15_2934 0.84 +0.1
3,076,336 + HP15_2934 0.87 -1.5
3,076,689 - HP15_2935 0.11 -0.6
3,076,822 + HP15_2935 0.20 -1.0
3,076,822 + HP15_2935 0.20 -0.3
3,076,822 + HP15_2935 0.20 +0.0
3,076,822 + HP15_2935 0.20 +0.1
3,076,861 - HP15_2935 0.22 +0.3
3,076,916 + HP15_2935 0.26 +2.1
3,077,222 + HP15_2935 0.46 -0.8
3,077,233 + HP15_2935 0.46 -0.4
3,077,241 - HP15_2935 0.47 +1.6
3,077,496 + HP15_2935 0.63 -1.0
3,077,496 + HP15_2935 0.63 -0.9
3,077,735 + HP15_2935 0.79 -0.7
3,077,754 + HP15_2935 0.80 -1.4
3,077,787 - HP15_2935 0.82 +0.3
3,077,990 - -0.3
3,077,996 - +0.9
3,078,082 + -0.8
3,078,201 + HP15_2936 0.11 -0.4
3,078,272 + HP15_2936 0.16 +0.4
3,078,428 - HP15_2936 0.28 +1.8
3,078,557 + HP15_2936 0.37 -0.3
3,078,873 - HP15_2936 0.61 -0.0
3,078,873 - HP15_2936 0.61 -0.2
3,079,023 - HP15_2936 0.72 -0.2
3,079,045 + HP15_2936 0.74 +0.5

Or see this region's nucleotide sequence