Experiment: Urea as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2934 and HP15_2935 are separated by 8 nucleotides HP15_2935 and HP15_2936 overlap by 4 nucleotides
HP15_2934: HP15_2934 - protein YeaH, at 3,075,217 to 3,076,506
_2934
HP15_2935: HP15_2935 - SpoVR family protein, at 3,076,515 to 3,078,062
_2935
HP15_2936: HP15_2936 - periplasmic sensor signal transduction histidine kinase, at 3,078,059 to 3,079,396
_2936
Position (kb)
3076
3077
3078
3079 Strain fitness (log2 ratio)
-1
0
1
2 at 3075.517 kb on - strand, within HP15_2934 at 3075.520 kb on + strand, within HP15_2934 at 3075.547 kb on - strand, within HP15_2934 at 3075.605 kb on + strand, within HP15_2934 at 3075.710 kb on - strand, within HP15_2934 at 3075.774 kb on + strand, within HP15_2934 at 3075.850 kb on - strand, within HP15_2934 at 3076.124 kb on - strand, within HP15_2934 at 3076.177 kb on + strand, within HP15_2934 at 3076.216 kb on - strand, within HP15_2934 at 3076.304 kb on + strand, within HP15_2934 at 3076.336 kb on + strand, within HP15_2934 at 3076.689 kb on - strand, within HP15_2935 at 3076.822 kb on + strand, within HP15_2935 at 3076.822 kb on + strand, within HP15_2935 at 3076.822 kb on + strand, within HP15_2935 at 3076.822 kb on + strand, within HP15_2935 at 3076.861 kb on - strand, within HP15_2935 at 3076.916 kb on + strand, within HP15_2935 at 3077.222 kb on + strand, within HP15_2935 at 3077.233 kb on + strand, within HP15_2935 at 3077.241 kb on - strand, within HP15_2935 at 3077.496 kb on + strand, within HP15_2935 at 3077.496 kb on + strand, within HP15_2935 at 3077.735 kb on + strand, within HP15_2935 at 3077.754 kb on + strand, within HP15_2935 at 3077.787 kb on - strand, within HP15_2935 at 3077.990 kb on - strand at 3077.996 kb on - strand at 3078.082 kb on + strand at 3078.201 kb on + strand, within HP15_2936 at 3078.272 kb on + strand, within HP15_2936 at 3078.428 kb on - strand, within HP15_2936 at 3078.557 kb on + strand, within HP15_2936 at 3078.873 kb on - strand, within HP15_2936 at 3078.873 kb on - strand, within HP15_2936 at 3079.023 kb on - strand, within HP15_2936 at 3079.045 kb on + strand, within HP15_2936
Per-strain Table
Position Strand Gene LocusTag Fraction Urea as (N) remove 3,075,517 - HP15_2934 0.23 -0.4 3,075,520 + HP15_2934 0.23 -0.6 3,075,547 - HP15_2934 0.26 +2.2 3,075,605 + HP15_2934 0.30 -0.4 3,075,710 - HP15_2934 0.38 +0.9 3,075,774 + HP15_2934 0.43 -0.8 3,075,850 - HP15_2934 0.49 -0.0 3,076,124 - HP15_2934 0.70 +1.9 3,076,177 + HP15_2934 0.74 -1.2 3,076,216 - HP15_2934 0.77 +2.1 3,076,304 + HP15_2934 0.84 +0.1 3,076,336 + HP15_2934 0.87 -1.5 3,076,689 - HP15_2935 0.11 -0.6 3,076,822 + HP15_2935 0.20 -1.0 3,076,822 + HP15_2935 0.20 -0.3 3,076,822 + HP15_2935 0.20 +0.0 3,076,822 + HP15_2935 0.20 +0.1 3,076,861 - HP15_2935 0.22 +0.3 3,076,916 + HP15_2935 0.26 +2.1 3,077,222 + HP15_2935 0.46 -0.8 3,077,233 + HP15_2935 0.46 -0.4 3,077,241 - HP15_2935 0.47 +1.6 3,077,496 + HP15_2935 0.63 -1.0 3,077,496 + HP15_2935 0.63 -0.9 3,077,735 + HP15_2935 0.79 -0.7 3,077,754 + HP15_2935 0.80 -1.4 3,077,787 - HP15_2935 0.82 +0.3 3,077,990 - -0.3 3,077,996 - +0.9 3,078,082 + -0.8 3,078,201 + HP15_2936 0.11 -0.4 3,078,272 + HP15_2936 0.16 +0.4 3,078,428 - HP15_2936 0.28 +1.8 3,078,557 + HP15_2936 0.37 -0.3 3,078,873 - HP15_2936 0.61 -0.0 3,078,873 - HP15_2936 0.61 -0.2 3,079,023 - HP15_2936 0.72 -0.2 3,079,045 + HP15_2936 0.74 +0.5
Or see this region's nucleotide sequence