Strain Fitness in Marinobacter adhaerens HP15 around HP15_1727

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1726 and HP15_1727 overlap by 4 nucleotidesHP15_1727 and HP15_1728 are separated by 216 nucleotides HP15_1726: HP15_1726 - selenide water dikinase, at 1,824,863 to 1,827,139 _1726 HP15_1727: HP15_1727 - glycosyltransferase, at 1,827,136 to 1,828,110 _1727 HP15_1728: HP15_1728 - phosphonate ABC transporter, periplasmic phosphonate-binding protein, at 1,828,327 to 1,829,175 _1728 Position (kb) 1827 1828 1829Strain fitness (log2 ratio) -1 0 1 2 3at 1826.142 kb on - strand, within HP15_1726at 1826.175 kb on - strand, within HP15_1726at 1826.252 kb on + strand, within HP15_1726at 1826.260 kb on - strand, within HP15_1726at 1826.503 kb on + strand, within HP15_1726at 1826.516 kb on + strand, within HP15_1726at 1826.524 kb on - strand, within HP15_1726at 1826.640 kb on + strand, within HP15_1726at 1826.781 kb on - strand, within HP15_1726at 1826.794 kb on + strand, within HP15_1726at 1827.016 kb on + strandat 1827.021 kb on + strandat 1827.023 kb on + strandat 1827.041 kb on - strandat 1827.058 kb on - strandat 1827.097 kb on + strandat 1827.119 kb on + strandat 1827.144 kb on + strandat 1827.152 kb on - strandat 1827.154 kb on + strandat 1827.154 kb on + strandat 1827.154 kb on + strandat 1827.172 kb on - strandat 1827.275 kb on + strand, within HP15_1727at 1827.433 kb on - strand, within HP15_1727at 1827.562 kb on + strand, within HP15_1727at 1827.623 kb on + strand, within HP15_1727at 1827.631 kb on - strand, within HP15_1727at 1827.800 kb on - strand, within HP15_1727at 1827.902 kb on - strand, within HP15_1727at 1828.022 kb on - strandat 1828.046 kb on + strandat 1828.067 kb on + strandat 1828.100 kb on + strandat 1828.124 kb on + strandat 1828.190 kb on + strandat 1828.198 kb on - strandat 1828.243 kb on - strandat 1828.305 kb on + strandat 1828.369 kb on + strandat 1828.369 kb on + strandat 1828.428 kb on + strand, within HP15_1728at 1828.428 kb on + strand, within HP15_1728at 1828.487 kb on - strand, within HP15_1728at 1828.653 kb on + strand, within HP15_1728at 1828.725 kb on - strand, within HP15_1728at 1828.873 kb on + strand, within HP15_1728at 1829.027 kb on + strand, within HP15_1728at 1829.027 kb on + strand, within HP15_1728at 1829.079 kb on + strand, within HP15_1728at 1829.087 kb on - strand, within HP15_1728at 1829.097 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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1,826,142 - HP15_1726 0.56 -0.9
1,826,175 - HP15_1726 0.58 -0.3
1,826,252 + HP15_1726 0.61 +2.3
1,826,260 - HP15_1726 0.61 -0.0
1,826,503 + HP15_1726 0.72 -0.4
1,826,516 + HP15_1726 0.73 -0.2
1,826,524 - HP15_1726 0.73 -0.5
1,826,640 + HP15_1726 0.78 +1.9
1,826,781 - HP15_1726 0.84 +1.9
1,826,794 + HP15_1726 0.85 +2.6
1,827,016 + -0.6
1,827,021 + -0.1
1,827,023 + +0.5
1,827,041 - +0.1
1,827,058 - +2.1
1,827,097 + +2.6
1,827,119 + +2.1
1,827,144 + -0.5
1,827,152 - +1.9
1,827,154 + +0.9
1,827,154 + -0.5
1,827,154 + -0.6
1,827,172 - +0.1
1,827,275 + HP15_1727 0.14 -0.3
1,827,433 - HP15_1727 0.30 -1.2
1,827,562 + HP15_1727 0.44 -1.0
1,827,623 + HP15_1727 0.50 +0.0
1,827,631 - HP15_1727 0.51 -0.3
1,827,800 - HP15_1727 0.68 -0.0
1,827,902 - HP15_1727 0.79 -0.2
1,828,022 - -0.2
1,828,046 + +0.8
1,828,067 + +1.9
1,828,100 + -0.3
1,828,124 + +0.8
1,828,190 + -0.4
1,828,198 - +1.5
1,828,243 - +2.9
1,828,305 + -1.2
1,828,369 + +0.4
1,828,369 + +0.4
1,828,428 + HP15_1728 0.12 -1.5
1,828,428 + HP15_1728 0.12 -0.0
1,828,487 - HP15_1728 0.19 +1.7
1,828,653 + HP15_1728 0.38 -0.6
1,828,725 - HP15_1728 0.47 -0.1
1,828,873 + HP15_1728 0.64 -0.2
1,829,027 + HP15_1728 0.82 -0.4
1,829,027 + HP15_1728 0.82 -0.6
1,829,079 + HP15_1728 0.89 +2.0
1,829,087 - HP15_1728 0.90 -0.3
1,829,097 + +1.6

Or see this region's nucleotide sequence