Experiment: Urea as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1726 and HP15_1727 overlap by 4 nucleotides HP15_1727 and HP15_1728 are separated by 216 nucleotides
HP15_1726: HP15_1726 - selenide water dikinase, at 1,824,863 to 1,827,139
_1726
HP15_1727: HP15_1727 - glycosyltransferase, at 1,827,136 to 1,828,110
_1727
HP15_1728: HP15_1728 - phosphonate ABC transporter, periplasmic phosphonate-binding protein, at 1,828,327 to 1,829,175
_1728
Position (kb)
1827
1828
1829 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1826.142 kb on - strand, within HP15_1726 at 1826.175 kb on - strand, within HP15_1726 at 1826.252 kb on + strand, within HP15_1726 at 1826.260 kb on - strand, within HP15_1726 at 1826.503 kb on + strand, within HP15_1726 at 1826.516 kb on + strand, within HP15_1726 at 1826.524 kb on - strand, within HP15_1726 at 1826.640 kb on + strand, within HP15_1726 at 1826.781 kb on - strand, within HP15_1726 at 1826.794 kb on + strand, within HP15_1726 at 1827.016 kb on + strand at 1827.021 kb on + strand at 1827.023 kb on + strand at 1827.041 kb on - strand at 1827.058 kb on - strand at 1827.097 kb on + strand at 1827.119 kb on + strand at 1827.144 kb on + strand at 1827.152 kb on - strand at 1827.154 kb on + strand at 1827.154 kb on + strand at 1827.154 kb on + strand at 1827.172 kb on - strand at 1827.275 kb on + strand, within HP15_1727 at 1827.433 kb on - strand, within HP15_1727 at 1827.562 kb on + strand, within HP15_1727 at 1827.623 kb on + strand, within HP15_1727 at 1827.631 kb on - strand, within HP15_1727 at 1827.800 kb on - strand, within HP15_1727 at 1827.902 kb on - strand, within HP15_1727 at 1828.022 kb on - strand at 1828.046 kb on + strand at 1828.067 kb on + strand at 1828.100 kb on + strand at 1828.124 kb on + strand at 1828.190 kb on + strand at 1828.198 kb on - strand at 1828.243 kb on - strand at 1828.305 kb on + strand at 1828.369 kb on + strand at 1828.369 kb on + strand at 1828.428 kb on + strand, within HP15_1728 at 1828.428 kb on + strand, within HP15_1728 at 1828.487 kb on - strand, within HP15_1728 at 1828.653 kb on + strand, within HP15_1728 at 1828.725 kb on - strand, within HP15_1728 at 1828.873 kb on + strand, within HP15_1728 at 1829.027 kb on + strand, within HP15_1728 at 1829.027 kb on + strand, within HP15_1728 at 1829.079 kb on + strand, within HP15_1728 at 1829.087 kb on - strand, within HP15_1728 at 1829.097 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea as (N) remove 1,826,142 - HP15_1726 0.56 -0.9 1,826,175 - HP15_1726 0.58 -0.3 1,826,252 + HP15_1726 0.61 +2.3 1,826,260 - HP15_1726 0.61 -0.0 1,826,503 + HP15_1726 0.72 -0.4 1,826,516 + HP15_1726 0.73 -0.2 1,826,524 - HP15_1726 0.73 -0.5 1,826,640 + HP15_1726 0.78 +1.9 1,826,781 - HP15_1726 0.84 +1.9 1,826,794 + HP15_1726 0.85 +2.6 1,827,016 + -0.6 1,827,021 + -0.1 1,827,023 + +0.5 1,827,041 - +0.1 1,827,058 - +2.1 1,827,097 + +2.6 1,827,119 + +2.1 1,827,144 + -0.5 1,827,152 - +1.9 1,827,154 + +0.9 1,827,154 + -0.5 1,827,154 + -0.6 1,827,172 - +0.1 1,827,275 + HP15_1727 0.14 -0.3 1,827,433 - HP15_1727 0.30 -1.2 1,827,562 + HP15_1727 0.44 -1.0 1,827,623 + HP15_1727 0.50 +0.0 1,827,631 - HP15_1727 0.51 -0.3 1,827,800 - HP15_1727 0.68 -0.0 1,827,902 - HP15_1727 0.79 -0.2 1,828,022 - -0.2 1,828,046 + +0.8 1,828,067 + +1.9 1,828,100 + -0.3 1,828,124 + +0.8 1,828,190 + -0.4 1,828,198 - +1.5 1,828,243 - +2.9 1,828,305 + -1.2 1,828,369 + +0.4 1,828,369 + +0.4 1,828,428 + HP15_1728 0.12 -1.5 1,828,428 + HP15_1728 0.12 -0.0 1,828,487 - HP15_1728 0.19 +1.7 1,828,653 + HP15_1728 0.38 -0.6 1,828,725 - HP15_1728 0.47 -0.1 1,828,873 + HP15_1728 0.64 -0.2 1,829,027 + HP15_1728 0.82 -0.4 1,829,027 + HP15_1728 0.82 -0.6 1,829,079 + HP15_1728 0.89 +2.0 1,829,087 - HP15_1728 0.90 -0.3 1,829,097 + +1.6
Or see this region's nucleotide sequence