Strain Fitness in Marinobacter adhaerens HP15 around HP15_1380

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1379 and HP15_1380 are separated by 50 nucleotidesHP15_1380 and HP15_1381 are separated by 107 nucleotidesHP15_1381 and HP15_1382 are separated by 61 nucleotides HP15_1379: HP15_1379 - RNA methylase, at 1,453,324 to 1,455,459 _1379 HP15_1380: HP15_1380 - conserved hypothetical protein, secreted, at 1,455,510 to 1,456,118 _1380 HP15_1381: HP15_1381 - conserved hypothetical protein, at 1,456,226 to 1,456,711 _1381 HP15_1382: HP15_1382 - M18-family aminopeptidase 2, at 1,456,773 to 1,458,122 _1382 Position (kb) 1455 1456 1457Strain fitness (log2 ratio) -1 0 1 2at 1454.558 kb on + strand, within HP15_1379at 1454.566 kb on - strand, within HP15_1379at 1454.568 kb on + strand, within HP15_1379at 1454.590 kb on + strand, within HP15_1379at 1454.756 kb on - strand, within HP15_1379at 1454.891 kb on - strand, within HP15_1379at 1454.934 kb on + strand, within HP15_1379at 1455.013 kb on + strand, within HP15_1379at 1455.045 kb on + strand, within HP15_1379at 1455.091 kb on - strand, within HP15_1379at 1455.093 kb on + strand, within HP15_1379at 1455.106 kb on - strand, within HP15_1379at 1455.454 kb on + strandat 1455.699 kb on - strand, within HP15_1380at 1455.760 kb on + strand, within HP15_1380at 1455.767 kb on + strand, within HP15_1380at 1455.792 kb on + strand, within HP15_1380at 1455.792 kb on + strand, within HP15_1380at 1455.800 kb on - strand, within HP15_1380at 1455.800 kb on - strand, within HP15_1380at 1455.846 kb on + strand, within HP15_1380at 1455.847 kb on - strand, within HP15_1380at 1456.044 kb on - strand, within HP15_1380at 1456.089 kb on + strandat 1456.097 kb on - strandat 1456.108 kb on + strandat 1456.116 kb on - strandat 1456.199 kb on - strandat 1456.238 kb on + strandat 1456.251 kb on - strandat 1456.771 kb on + strandat 1456.779 kb on - strandat 1456.845 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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1,454,558 + HP15_1379 0.58 -0.0
1,454,566 - HP15_1379 0.58 -0.2
1,454,568 + HP15_1379 0.58 +0.3
1,454,590 + HP15_1379 0.59 +1.7
1,454,756 - HP15_1379 0.67 +0.1
1,454,891 - HP15_1379 0.73 -0.1
1,454,934 + HP15_1379 0.75 +0.2
1,455,013 + HP15_1379 0.79 +0.3
1,455,045 + HP15_1379 0.81 -0.6
1,455,091 - HP15_1379 0.83 +2.3
1,455,093 + HP15_1379 0.83 +2.4
1,455,106 - HP15_1379 0.83 +0.9
1,455,454 + +0.3
1,455,699 - HP15_1380 0.31 -0.3
1,455,760 + HP15_1380 0.41 +0.3
1,455,767 + HP15_1380 0.42 -0.5
1,455,792 + HP15_1380 0.46 +2.5
1,455,792 + HP15_1380 0.46 +2.2
1,455,800 - HP15_1380 0.48 +1.9
1,455,800 - HP15_1380 0.48 +2.0
1,455,846 + HP15_1380 0.55 +1.7
1,455,847 - HP15_1380 0.55 -0.2
1,456,044 - HP15_1380 0.88 +0.5
1,456,089 + -0.2
1,456,097 - -0.4
1,456,108 + -1.2
1,456,116 - +2.0
1,456,199 - +0.0
1,456,238 + -0.3
1,456,251 - +1.5
1,456,771 + +1.9
1,456,779 - +2.0
1,456,845 + -0.6

Or see this region's nucleotide sequence