Experiment: Urea as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1303 and HP15_1304 are separated by 12 nucleotides HP15_1304 and HP15_1305 are separated by 0 nucleotides HP15_1305 and HP15_1306 are separated by 223 nucleotides
HP15_1303: HP15_1303 - chromosome partitioning protein, ParA family, at 1,363,192 to 1,363,980
_1303
HP15_1304: HP15_1304 - protein containing DUF446, at 1,363,993 to 1,364,328
_1304
HP15_1305: HP15_1305 - nicotinate-nucleotide pyrophosphorylase, at 1,364,329 to 1,365,168
_1305
HP15_1306: HP15_1306 - protein containing DUF1631, at 1,365,392 to 1,367,689
_1306
Position (kb)
1364
1365
1366 Strain fitness (log2 ratio)
-1
0
1
2 at 1363.361 kb on - strand, within HP15_1303 at 1363.393 kb on + strand, within HP15_1303 at 1363.457 kb on + strand, within HP15_1303 at 1363.636 kb on - strand, within HP15_1303 at 1363.669 kb on + strand, within HP15_1303 at 1363.671 kb on + strand, within HP15_1303 at 1363.677 kb on - strand, within HP15_1303 at 1363.679 kb on - strand, within HP15_1303 at 1363.679 kb on - strand, within HP15_1303 at 1363.679 kb on - strand, within HP15_1303 at 1363.751 kb on + strand, within HP15_1303 at 1363.980 kb on + strand at 1363.997 kb on - strand at 1364.069 kb on + strand, within HP15_1304 at 1364.321 kb on - strand at 1365.194 kb on - strand at 1365.246 kb on + strand at 1365.248 kb on - strand at 1365.278 kb on + strand at 1365.375 kb on - strand at 1365.395 kb on - strand at 1365.483 kb on + strand at 1365.488 kb on + strand at 1365.534 kb on + strand at 1365.552 kb on - strand at 1365.652 kb on - strand, within HP15_1306 at 1365.710 kb on - strand, within HP15_1306 at 1365.864 kb on + strand, within HP15_1306 at 1365.923 kb on + strand, within HP15_1306 at 1365.923 kb on + strand, within HP15_1306 at 1365.928 kb on + strand, within HP15_1306 at 1365.933 kb on + strand, within HP15_1306 at 1366.083 kb on + strand, within HP15_1306 at 1366.136 kb on - strand, within HP15_1306
Per-strain Table
Position Strand Gene LocusTag Fraction Urea as (N) remove 1,363,361 - HP15_1303 0.21 -1.4 1,363,393 + HP15_1303 0.25 -0.6 1,363,457 + HP15_1303 0.34 +2.2 1,363,636 - HP15_1303 0.56 +1.7 1,363,669 + HP15_1303 0.60 -0.5 1,363,671 + HP15_1303 0.61 +1.8 1,363,677 - HP15_1303 0.61 +1.9 1,363,679 - HP15_1303 0.62 -1.0 1,363,679 - HP15_1303 0.62 -0.1 1,363,679 - HP15_1303 0.62 -0.8 1,363,751 + HP15_1303 0.71 +2.1 1,363,980 + -0.7 1,363,997 - -0.0 1,364,069 + HP15_1304 0.23 +1.9 1,364,321 - -0.4 1,365,194 - +1.9 1,365,246 + -0.3 1,365,248 - -1.0 1,365,278 + +1.8 1,365,375 - +0.2 1,365,395 - -0.2 1,365,483 + -0.2 1,365,488 + -0.0 1,365,534 + +2.4 1,365,552 - -1.2 1,365,652 - HP15_1306 0.11 -0.8 1,365,710 - HP15_1306 0.14 +2.6 1,365,864 + HP15_1306 0.21 +1.4 1,365,923 + HP15_1306 0.23 -0.6 1,365,923 + HP15_1306 0.23 +1.3 1,365,928 + HP15_1306 0.23 -0.2 1,365,933 + HP15_1306 0.24 -0.5 1,366,083 + HP15_1306 0.30 -0.3 1,366,136 - HP15_1306 0.32 -0.2
Or see this region's nucleotide sequence