Strain Fitness in Marinobacter adhaerens HP15 around HP15_10

Experiment: Urea as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_9 and HP15_10 are separated by 124 nucleotidesHP15_10 and HP15_11 are separated by 62 nucleotides HP15_9: HP15_9 - BNR/Asp-box repeat protein, at 10,091 to 11,251 _9 HP15_10: HP15_10 - transporter, at 11,376 to 13,913 _10 HP15_11: HP15_11 - conserved hypothetical protein, at 13,976 to 14,941 _11 Position (kb) 11 12 13 14Strain fitness (log2 ratio) -2 -1 0 1 2 3at 10.389 kb on + strand, within HP15_9at 10.390 kb on + strand, within HP15_9at 10.417 kb on - strand, within HP15_9at 10.444 kb on + strand, within HP15_9at 10.482 kb on + strand, within HP15_9at 10.506 kb on - strand, within HP15_9at 10.560 kb on - strand, within HP15_9at 10.608 kb on - strand, within HP15_9at 10.698 kb on - strand, within HP15_9at 10.720 kb on + strand, within HP15_9at 10.728 kb on - strand, within HP15_9at 10.739 kb on + strand, within HP15_9at 10.739 kb on + strand, within HP15_9at 10.747 kb on - strand, within HP15_9at 10.747 kb on - strand, within HP15_9at 10.747 kb on - strand, within HP15_9at 10.747 kb on - strand, within HP15_9at 10.787 kb on + strand, within HP15_9at 10.792 kb on + strand, within HP15_9at 10.792 kb on + strand, within HP15_9at 10.800 kb on - strand, within HP15_9at 10.826 kb on + strand, within HP15_9at 10.831 kb on + strand, within HP15_9at 10.836 kb on - strand, within HP15_9at 10.850 kb on + strand, within HP15_9at 10.858 kb on - strand, within HP15_9at 10.881 kb on + strand, within HP15_9at 10.881 kb on + strand, within HP15_9at 10.881 kb on + strand, within HP15_9at 10.882 kb on - strand, within HP15_9at 10.899 kb on - strand, within HP15_9at 10.899 kb on - strand, within HP15_9at 10.899 kb on - strand, within HP15_9at 10.954 kb on - strand, within HP15_9at 10.954 kb on - strand, within HP15_9at 11.046 kb on + strand, within HP15_9at 11.093 kb on + strand, within HP15_9at 11.171 kb on + strandat 11.277 kb on - strandat 11.334 kb on + strandat 11.338 kb on - strandat 11.357 kb on - strandat 11.362 kb on - strandat 11.400 kb on + strandat 11.427 kb on - strandat 11.448 kb on - strandat 11.500 kb on - strandat 11.609 kb on + strandat 11.609 kb on + strandat 11.701 kb on + strand, within HP15_10at 11.701 kb on + strand, within HP15_10at 11.709 kb on - strand, within HP15_10at 11.709 kb on - strand, within HP15_10at 11.773 kb on - strand, within HP15_10at 11.788 kb on + strand, within HP15_10at 11.788 kb on + strand, within HP15_10at 11.788 kb on + strand, within HP15_10at 11.788 kb on + strand, within HP15_10at 11.790 kb on + strand, within HP15_10at 11.796 kb on - strand, within HP15_10at 11.832 kb on - strand, within HP15_10at 11.838 kb on + strand, within HP15_10at 11.848 kb on + strand, within HP15_10at 11.890 kb on + strand, within HP15_10at 11.895 kb on + strand, within HP15_10at 11.903 kb on + strand, within HP15_10at 11.903 kb on - strand, within HP15_10at 11.916 kb on - strand, within HP15_10at 11.960 kb on - strand, within HP15_10at 11.974 kb on - strand, within HP15_10at 12.163 kb on + strand, within HP15_10at 12.169 kb on + strand, within HP15_10at 12.169 kb on + strand, within HP15_10at 12.174 kb on + strand, within HP15_10at 12.192 kb on - strand, within HP15_10at 12.202 kb on + strand, within HP15_10at 12.202 kb on + strand, within HP15_10at 12.215 kb on - strand, within HP15_10at 12.229 kb on - strand, within HP15_10at 12.248 kb on - strand, within HP15_10at 12.266 kb on + strand, within HP15_10at 12.279 kb on - strand, within HP15_10at 12.311 kb on + strand, within HP15_10at 12.324 kb on + strand, within HP15_10at 12.374 kb on - strand, within HP15_10at 12.384 kb on + strand, within HP15_10at 12.386 kb on + strand, within HP15_10at 12.445 kb on + strand, within HP15_10at 12.461 kb on - strand, within HP15_10at 12.563 kb on - strand, within HP15_10at 12.643 kb on + strand, within HP15_10at 12.764 kb on + strand, within HP15_10at 12.789 kb on + strand, within HP15_10at 12.793 kb on - strand, within HP15_10at 12.875 kb on + strand, within HP15_10at 12.882 kb on - strand, within HP15_10at 12.949 kb on + strand, within HP15_10at 12.949 kb on + strand, within HP15_10at 12.949 kb on + strand, within HP15_10at 12.957 kb on - strand, within HP15_10at 12.992 kb on + strand, within HP15_10at 13.008 kb on - strand, within HP15_10at 13.008 kb on - strand, within HP15_10at 13.011 kb on + strand, within HP15_10at 13.011 kb on + strand, within HP15_10at 13.016 kb on + strand, within HP15_10at 13.019 kb on - strand, within HP15_10at 13.024 kb on - strand, within HP15_10at 13.093 kb on + strand, within HP15_10at 13.106 kb on - strand, within HP15_10at 13.107 kb on + strand, within HP15_10at 13.115 kb on - strand, within HP15_10at 13.115 kb on - strand, within HP15_10at 13.188 kb on + strand, within HP15_10at 13.268 kb on - strand, within HP15_10at 13.312 kb on - strand, within HP15_10at 13.331 kb on + strand, within HP15_10at 13.337 kb on - strand, within HP15_10at 13.339 kb on - strand, within HP15_10at 13.339 kb on - strand, within HP15_10at 13.339 kb on - strand, within HP15_10at 13.344 kb on + strand, within HP15_10at 13.352 kb on - strand, within HP15_10at 13.365 kb on + strand, within HP15_10at 13.365 kb on + strand, within HP15_10at 13.398 kb on + strand, within HP15_10at 13.455 kb on + strand, within HP15_10at 13.462 kb on + strand, within HP15_10at 13.462 kb on + strand, within HP15_10at 13.463 kb on - strand, within HP15_10at 13.467 kb on + strand, within HP15_10at 13.467 kb on + strand, within HP15_10at 13.467 kb on + strand, within HP15_10at 13.475 kb on - strand, within HP15_10at 13.475 kb on - strand, within HP15_10at 13.512 kb on - strand, within HP15_10at 13.589 kb on - strand, within HP15_10at 13.599 kb on + strand, within HP15_10at 13.599 kb on + strand, within HP15_10at 13.599 kb on + strand, within HP15_10at 13.675 kb on - strandat 13.766 kb on + strandat 13.883 kb on - strandat 13.896 kb on - strandat 13.933 kb on + strandat 13.941 kb on - strandat 13.941 kb on - strandat 13.976 kb on - strandat 14.148 kb on - strand, within HP15_11at 14.245 kb on + strand, within HP15_11at 14.271 kb on - strand, within HP15_11at 14.443 kb on - strand, within HP15_11at 14.487 kb on + strand, within HP15_11at 14.535 kb on - strand, within HP15_11at 14.554 kb on + strand, within HP15_11at 14.562 kb on - strand, within HP15_11at 14.566 kb on - strand, within HP15_11at 14.578 kb on - strand, within HP15_11at 14.583 kb on - strand, within HP15_11at 14.583 kb on - strand, within HP15_11at 14.620 kb on + strand, within HP15_11at 14.707 kb on + strand, within HP15_11at 14.715 kb on - strand, within HP15_11at 14.754 kb on + strand, within HP15_11at 14.796 kb on + strand, within HP15_11at 14.847 kb on + strandat 14.872 kb on + strandat 14.873 kb on + strandat 14.879 kb on + strandat 14.880 kb on - strandat 14.903 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea as (N)
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10,389 + HP15_9 0.26 +0.8
10,390 + HP15_9 0.26 -1.0
10,417 - HP15_9 0.28 -0.8
10,444 + HP15_9 0.30 -1.3
10,482 + HP15_9 0.34 +0.3
10,506 - HP15_9 0.36 -0.9
10,560 - HP15_9 0.40 -0.5
10,608 - HP15_9 0.45 -1.4
10,698 - HP15_9 0.52 +0.2
10,720 + HP15_9 0.54 +0.6
10,728 - HP15_9 0.55 +0.8
10,739 + HP15_9 0.56 +0.5
10,739 + HP15_9 0.56 +0.9
10,747 - HP15_9 0.57 +0.1
10,747 - HP15_9 0.57 -0.4
10,747 - HP15_9 0.57 +2.2
10,747 - HP15_9 0.57 +2.1
10,787 + HP15_9 0.60 +0.3
10,792 + HP15_9 0.60 -0.1
10,792 + HP15_9 0.60 +1.6
10,800 - HP15_9 0.61 +2.3
10,826 + HP15_9 0.63 +2.4
10,831 + HP15_9 0.64 +2.0
10,836 - HP15_9 0.64 +0.1
10,850 + HP15_9 0.65 +0.4
10,858 - HP15_9 0.66 -1.2
10,881 + HP15_9 0.68 -0.0
10,881 + HP15_9 0.68 +0.4
10,881 + HP15_9 0.68 +2.2
10,882 - HP15_9 0.68 -1.4
10,899 - HP15_9 0.70 +2.4
10,899 - HP15_9 0.70 +0.2
10,899 - HP15_9 0.70 +1.4
10,954 - HP15_9 0.74 +0.4
10,954 - HP15_9 0.74 -0.1
11,046 + HP15_9 0.82 -0.7
11,093 + HP15_9 0.86 -0.7
11,171 + -1.1
11,277 - -0.3
11,334 + -0.1
11,338 - -0.5
11,357 - +0.1
11,362 - -0.5
11,400 + -2.3
11,427 - -1.3
11,448 - +1.0
11,500 - +1.2
11,609 + +0.1
11,609 + +1.5
11,701 + HP15_10 0.13 -1.0
11,701 + HP15_10 0.13 -0.6
11,709 - HP15_10 0.13 -0.7
11,709 - HP15_10 0.13 -0.8
11,773 - HP15_10 0.16 -0.0
11,788 + HP15_10 0.16 +0.4
11,788 + HP15_10 0.16 -0.3
11,788 + HP15_10 0.16 +1.8
11,788 + HP15_10 0.16 +0.5
11,790 + HP15_10 0.16 -0.3
11,796 - HP15_10 0.17 +2.6
11,832 - HP15_10 0.18 +1.9
11,838 + HP15_10 0.18 -0.9
11,848 + HP15_10 0.19 +2.0
11,890 + HP15_10 0.20 +1.6
11,895 + HP15_10 0.20 -0.1
11,903 + HP15_10 0.21 -0.3
11,903 - HP15_10 0.21 +2.0
11,916 - HP15_10 0.21 -0.6
11,960 - HP15_10 0.23 +0.2
11,974 - HP15_10 0.24 -0.6
12,163 + HP15_10 0.31 +2.4
12,169 + HP15_10 0.31 -0.4
12,169 + HP15_10 0.31 +2.0
12,174 + HP15_10 0.31 -0.7
12,192 - HP15_10 0.32 +1.9
12,202 + HP15_10 0.33 +1.9
12,202 + HP15_10 0.33 -0.5
12,215 - HP15_10 0.33 +2.4
12,229 - HP15_10 0.34 +0.6
12,248 - HP15_10 0.34 -0.5
12,266 + HP15_10 0.35 +2.0
12,279 - HP15_10 0.36 +1.8
12,311 + HP15_10 0.37 -0.4
12,324 + HP15_10 0.37 -0.7
12,374 - HP15_10 0.39 -0.3
12,384 + HP15_10 0.40 +2.0
12,386 + HP15_10 0.40 +2.4
12,445 + HP15_10 0.42 -0.1
12,461 - HP15_10 0.43 -0.0
12,563 - HP15_10 0.47 +2.4
12,643 + HP15_10 0.50 +2.1
12,764 + HP15_10 0.55 -0.5
12,789 + HP15_10 0.56 +0.7
12,793 - HP15_10 0.56 +1.9
12,875 + HP15_10 0.59 -0.6
12,882 - HP15_10 0.59 +2.2
12,949 + HP15_10 0.62 -0.0
12,949 + HP15_10 0.62 -0.8
12,949 + HP15_10 0.62 +1.2
12,957 - HP15_10 0.62 -0.5
12,992 + HP15_10 0.64 +2.2
13,008 - HP15_10 0.64 +2.6
13,008 - HP15_10 0.64 +1.1
13,011 + HP15_10 0.64 +0.1
13,011 + HP15_10 0.64 +2.8
13,016 + HP15_10 0.65 +2.1
13,019 - HP15_10 0.65 -0.5
13,024 - HP15_10 0.65 -0.0
13,093 + HP15_10 0.68 -0.1
13,106 - HP15_10 0.68 +1.8
13,107 + HP15_10 0.68 +0.2
13,115 - HP15_10 0.69 +0.1
13,115 - HP15_10 0.69 -0.3
13,188 + HP15_10 0.71 -0.5
13,268 - HP15_10 0.75 -0.5
13,312 - HP15_10 0.76 -0.4
13,331 + HP15_10 0.77 -0.6
13,337 - HP15_10 0.77 +2.3
13,339 - HP15_10 0.77 +2.2
13,339 - HP15_10 0.77 +0.1
13,339 - HP15_10 0.77 +1.4
13,344 + HP15_10 0.78 -1.1
13,352 - HP15_10 0.78 +0.0
13,365 + HP15_10 0.78 +0.4
13,365 + HP15_10 0.78 -0.6
13,398 + HP15_10 0.80 +2.0
13,455 + HP15_10 0.82 +1.9
13,462 + HP15_10 0.82 -0.3
13,462 + HP15_10 0.82 -0.4
13,463 - HP15_10 0.82 +0.1
13,467 + HP15_10 0.82 -0.7
13,467 + HP15_10 0.82 +0.4
13,467 + HP15_10 0.82 -0.6
13,475 - HP15_10 0.83 -1.6
13,475 - HP15_10 0.83 +0.1
13,512 - HP15_10 0.84 -0.6
13,589 - HP15_10 0.87 +0.0
13,599 + HP15_10 0.88 -0.5
13,599 + HP15_10 0.88 +2.7
13,599 + HP15_10 0.88 -0.7
13,675 - -1.2
13,766 + +2.3
13,883 - +0.2
13,896 - -0.2
13,933 + +0.9
13,941 - -0.1
13,941 - -0.9
13,976 - -0.4
14,148 - HP15_11 0.18 +2.5
14,245 + HP15_11 0.28 +2.1
14,271 - HP15_11 0.31 +1.9
14,443 - HP15_11 0.48 -0.6
14,487 + HP15_11 0.53 -0.4
14,535 - HP15_11 0.58 -0.7
14,554 + HP15_11 0.60 -1.4
14,562 - HP15_11 0.61 +2.0
14,566 - HP15_11 0.61 +2.1
14,578 - HP15_11 0.62 +2.1
14,583 - HP15_11 0.63 -0.3
14,583 - HP15_11 0.63 +2.9
14,620 + HP15_11 0.67 +1.1
14,707 + HP15_11 0.76 -0.1
14,715 - HP15_11 0.77 -0.1
14,754 + HP15_11 0.81 -0.1
14,796 + HP15_11 0.85 -1.0
14,847 + +0.3
14,872 + -0.6
14,873 + +0.6
14,879 + +1.3
14,880 - +2.1
14,903 - +2.6

Or see this region's nucleotide sequence