Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3193 and DvMF_3194 are separated by 3 nucleotides DvMF_3194 and DvMF_3195 are separated by 565 nucleotides
DvMF_3193: DvMF_3193 - respiratory-chain NADH dehydrogenase subunit 1 (RefSeq), at 4,022,360 to 4,023,358
_3193
DvMF_3194: DvMF_3194 - NADH dehydrogenase (quinone) (RefSeq), at 4,023,362 to 4,027,156
_3194
DvMF_3195: DvMF_3195 - small multidrug resistance protein (RefSeq), at 4,027,722 to 4,028,090
_3195
Position (kb)
4023
4024
4025
4026
4027
4028 Strain fitness (log2 ratio)
-1
0
1
2 at 4022.587 kb on - strand, within DvMF_3193 at 4022.624 kb on + strand, within DvMF_3193 at 4023.304 kb on + strand at 4023.421 kb on - strand at 4023.515 kb on - strand at 4023.824 kb on - strand, within DvMF_3194 at 4023.824 kb on - strand, within DvMF_3194 at 4024.133 kb on - strand, within DvMF_3194 at 4024.203 kb on - strand, within DvMF_3194 at 4024.300 kb on - strand, within DvMF_3194 at 4024.589 kb on + strand, within DvMF_3194 at 4024.717 kb on - strand, within DvMF_3194 at 4024.824 kb on + strand, within DvMF_3194 at 4024.844 kb on + strand, within DvMF_3194 at 4024.850 kb on + strand, within DvMF_3194 at 4025.200 kb on - strand, within DvMF_3194 at 4025.219 kb on - strand, within DvMF_3194 at 4025.219 kb on - strand, within DvMF_3194 at 4025.527 kb on - strand, within DvMF_3194 at 4025.586 kb on + strand, within DvMF_3194 at 4025.620 kb on - strand, within DvMF_3194 at 4025.827 kb on + strand, within DvMF_3194 at 4026.181 kb on - strand, within DvMF_3194 at 4026.279 kb on - strand, within DvMF_3194 at 4026.341 kb on + strand, within DvMF_3194 at 4026.377 kb on + strand, within DvMF_3194 at 4026.500 kb on + strand, within DvMF_3194 at 4026.762 kb on - strand, within DvMF_3194 at 4027.702 kb on - strand at 4027.875 kb on + strand, within DvMF_3195 at 4027.895 kb on + strand, within DvMF_3195 at 4027.959 kb on - strand, within DvMF_3195 at 4028.020 kb on - strand, within DvMF_3195
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 4,022,587 - DvMF_3193 0.23 +0.8 4,022,624 + DvMF_3193 0.26 +1.8 4,023,304 + -0.4 4,023,421 - -0.0 4,023,515 - +1.3 4,023,824 - DvMF_3194 0.12 +0.5 4,023,824 - DvMF_3194 0.12 +0.3 4,024,133 - DvMF_3194 0.20 +0.2 4,024,203 - DvMF_3194 0.22 +1.0 4,024,300 - DvMF_3194 0.25 +0.2 4,024,589 + DvMF_3194 0.32 -0.1 4,024,717 - DvMF_3194 0.36 +0.4 4,024,824 + DvMF_3194 0.39 +0.6 4,024,844 + DvMF_3194 0.39 -1.1 4,024,850 + DvMF_3194 0.39 -0.5 4,025,200 - DvMF_3194 0.48 +0.3 4,025,219 - DvMF_3194 0.49 -0.2 4,025,219 - DvMF_3194 0.49 +0.4 4,025,527 - DvMF_3194 0.57 -0.2 4,025,586 + DvMF_3194 0.59 -0.4 4,025,620 - DvMF_3194 0.59 +0.4 4,025,827 + DvMF_3194 0.65 +0.4 4,026,181 - DvMF_3194 0.74 +0.3 4,026,279 - DvMF_3194 0.77 +0.3 4,026,341 + DvMF_3194 0.78 +0.3 4,026,377 + DvMF_3194 0.79 -0.1 4,026,500 + DvMF_3194 0.83 +0.4 4,026,762 - DvMF_3194 0.90 +0.5 4,027,702 - -0.9 4,027,875 + DvMF_3195 0.41 -1.0 4,027,895 + DvMF_3195 0.47 -1.0 4,027,959 - DvMF_3195 0.64 -0.6 4,028,020 - DvMF_3195 0.81 -0.9
Or see this region's nucleotide sequence