Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3155
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,978,438 | - | DvMF_3153 | 0.76 | -1.6 | |
3,978,490 | + | DvMF_3153 | 0.83 | -0.9 | |
3,978,568 | - | -1.1 | |||
3,978,669 | + | -1.8 | |||
3,978,821 | - | DvMF_3154 | 0.14 | -0.8 | |
3,978,861 | - | DvMF_3154 | 0.20 | -1.0 | |
3,978,991 | + | DvMF_3154 | 0.39 | -1.1 | |
3,979,028 | - | DvMF_3154 | 0.44 | -1.6 | |
3,979,458 | - | -0.7 | |||
3,979,489 | + | -0.6 | |||
3,979,497 | - | -0.5 | |||
3,979,612 | + | DvMF_3155 | 0.23 | -0.6 | |
3,979,822 | - | DvMF_3155 | 0.47 | -0.2 | |
3,979,828 | - | DvMF_3155 | 0.48 | -0.1 | |
3,980,388 | + | -1.0 | |||
3,980,388 | + | -1.1 | |||
3,980,396 | - | -0.6 | |||
3,980,465 | - | -1.0 | |||
3,980,886 | - | DvMF_3156 | 0.33 | -0.8 | |
3,980,900 | - | DvMF_3156 | 0.35 | -0.9 | |
3,981,087 | - | DvMF_3156 | 0.63 | -0.9 | |
3,981,257 | + | DvMF_3156 | 0.88 | -0.3 |
Or see this region's nucleotide sequence