Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2573 and DvMF_2574 overlap by 4 nucleotides DvMF_2574 and DvMF_2575 are separated by 351 nucleotides DvMF_2575 and DvMF_2576 are separated by 21 nucleotides
DvMF_2573: DvMF_2573 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,252,637 to 3,254,838
_2573
DvMF_2574: DvMF_2574 - Osmosensitive K channel His kinase sensor (RefSeq), at 3,254,835 to 3,255,962
_2574
DvMF_2575: DvMF_2575 - potassium-transporting ATPase, C subunit (RefSeq), at 3,256,314 to 3,256,907
_2575
DvMF_2576: DvMF_2576 - K+-transporting ATPase, B subunit (RefSeq), at 3,256,929 to 3,259,025
_2576
Position (kb)
3254
3255
3256 Strain fitness (log2 ratio)
-2
-1
0
1 at 3253.870 kb on - strand, within DvMF_2573 at 3254.612 kb on - strand, within DvMF_2573 at 3254.718 kb on + strand at 3254.828 kb on - strand at 3254.873 kb on + strand at 3255.022 kb on - strand, within DvMF_2574 at 3255.355 kb on - strand, within DvMF_2574 at 3255.392 kb on - strand, within DvMF_2574 at 3255.461 kb on + strand, within DvMF_2574 at 3255.721 kb on - strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.846 kb on - strand, within DvMF_2574 at 3255.904 kb on + strand at 3255.966 kb on + strand at 3256.039 kb on + strand at 3256.202 kb on + strand at 3256.745 kb on + strand, within DvMF_2575 at 3256.809 kb on + strand, within DvMF_2575 at 3256.822 kb on + strand, within DvMF_2575 at 3256.830 kb on - strand, within DvMF_2575 at 3256.859 kb on - strand at 3256.916 kb on + strand at 3256.937 kb on + strand at 3256.948 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 3,253,870 - DvMF_2573 0.56 -1.0 3,254,612 - DvMF_2573 0.90 -1.1 3,254,718 + -0.1 3,254,828 - -0.6 3,254,873 + -0.8 3,255,022 - DvMF_2574 0.17 -1.1 3,255,355 - DvMF_2574 0.46 -1.1 3,255,392 - DvMF_2574 0.49 -1.0 3,255,461 + DvMF_2574 0.55 -0.5 3,255,721 - DvMF_2574 0.79 -2.2 3,255,761 + DvMF_2574 0.82 -1.1 3,255,761 + DvMF_2574 0.82 -0.6 3,255,761 + DvMF_2574 0.82 -0.7 3,255,846 - DvMF_2574 0.90 -1.3 3,255,904 + -1.1 3,255,966 + -0.9 3,256,039 + -1.4 3,256,202 + -0.9 3,256,745 + DvMF_2575 0.73 -0.9 3,256,809 + DvMF_2575 0.83 -1.0 3,256,822 + DvMF_2575 0.86 -0.6 3,256,830 - DvMF_2575 0.87 -1.5 3,256,859 - -0.6 3,256,916 + -0.8 3,256,937 + -1.3 3,256,948 + -0.9
Or see this region's nucleotide sequence