Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2157
Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,689,641 | - | DvMF_2156 | 0.75 | -2.2 | |
2,689,720 | - | DvMF_2156 | 0.77 | -2.8 | |
2,689,874 | - | DvMF_2156 | 0.82 | -2.0 | |
2,690,073 | - | DvMF_2156 | 0.88 | -1.2 | |
2,690,073 | - | DvMF_2156 | 0.88 | -2.4 | |
2,690,223 | + | -1.9 | |||
2,690,231 | - | -2.5 | |||
2,690,271 | + | -2.5 | |||
2,690,320 | - | -2.1 | |||
2,690,457 | + | -1.5 | |||
2,690,480 | + | -1.7 | |||
2,690,488 | - | -1.1 | |||
2,690,529 | - | -2.6 | |||
2,690,579 | - | DvMF_2157 | 0.10 | -2.0 | |
2,691,043 | + | DvMF_2157 | 0.53 | -2.2 | |
2,691,046 | - | DvMF_2157 | 0.54 | -2.5 | |
2,691,051 | - | DvMF_2157 | 0.54 | -2.5 | |
2,691,859 | + | DvMF_2158 | 0.24 | +4.1 | |
2,691,867 | - | DvMF_2158 | 0.25 | +4.0 | |
2,691,867 | - | DvMF_2158 | 0.25 | +4.2 | |
2,691,873 | - | DvMF_2158 | 0.26 | +4.2 | |
2,692,290 | + | DvMF_2158 | 0.83 | +0.9 | |
2,692,333 | + | DvMF_2158 | 0.89 | -0.7 | |
2,692,540 | - | -0.7 |
Or see this region's nucleotide sequence