Experiment: MoYLS4 with Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2155 and DvMF_2156 are separated by 9 nucleotides DvMF_2156 and DvMF_2157 overlap by 4 nucleotides
DvMF_2155: DvMF_2155 - ABC-2 type transporter (RefSeq), at 2,685,836 to 2,687,143
_2155
DvMF_2156: DvMF_2156 - ABC transporter related (RefSeq), at 2,687,153 to 2,690,473
_2156
DvMF_2157: DvMF_2157 - secretion protein HlyD family protein (RefSeq), at 2,690,470 to 2,691,543
_2157
Position (kb)
2687
2688
2689
2690
2691 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2686.159 kb on + strand, within DvMF_2155 at 2686.179 kb on - strand, within DvMF_2155 at 2686.446 kb on - strand, within DvMF_2155 at 2686.468 kb on + strand, within DvMF_2155 at 2686.589 kb on + strand, within DvMF_2155 at 2686.816 kb on - strand, within DvMF_2155 at 2686.886 kb on - strand, within DvMF_2155 at 2687.156 kb on + strand at 2687.323 kb on + strand at 2687.451 kb on + strand at 2687.769 kb on + strand, within DvMF_2156 at 2687.804 kb on - strand, within DvMF_2156 at 2687.871 kb on + strand, within DvMF_2156 at 2688.238 kb on + strand, within DvMF_2156 at 2688.305 kb on - strand, within DvMF_2156 at 2688.409 kb on - strand, within DvMF_2156 at 2688.517 kb on + strand, within DvMF_2156 at 2688.559 kb on - strand, within DvMF_2156 at 2688.621 kb on + strand, within DvMF_2156 at 2688.637 kb on + strand, within DvMF_2156 at 2688.637 kb on + strand, within DvMF_2156 at 2688.700 kb on - strand, within DvMF_2156 at 2688.896 kb on - strand, within DvMF_2156 at 2688.943 kb on - strand, within DvMF_2156 at 2689.005 kb on + strand, within DvMF_2156 at 2689.087 kb on - strand, within DvMF_2156 at 2689.334 kb on + strand, within DvMF_2156 at 2689.641 kb on - strand, within DvMF_2156 at 2689.720 kb on - strand, within DvMF_2156 at 2689.874 kb on - strand, within DvMF_2156 at 2690.073 kb on - strand, within DvMF_2156 at 2690.073 kb on - strand, within DvMF_2156 at 2690.223 kb on + strand at 2690.231 kb on - strand at 2690.271 kb on + strand at 2690.320 kb on - strand at 2690.457 kb on + strand at 2690.480 kb on + strand at 2690.488 kb on - strand at 2690.529 kb on - strand at 2690.579 kb on - strand, within DvMF_2157 at 2691.043 kb on + strand, within DvMF_2157 at 2691.046 kb on - strand, within DvMF_2157 at 2691.051 kb on - strand, within DvMF_2157
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nalidixic 0.0078125 mg/ml remove 2,686,159 + DvMF_2155 0.25 -2.1 2,686,179 - DvMF_2155 0.26 -2.4 2,686,446 - DvMF_2155 0.47 -2.4 2,686,468 + DvMF_2155 0.48 -2.5 2,686,589 + DvMF_2155 0.58 -2.4 2,686,816 - DvMF_2155 0.75 -1.6 2,686,886 - DvMF_2155 0.80 -2.4 2,687,156 + -2.4 2,687,323 + -2.5 2,687,451 + -2.0 2,687,769 + DvMF_2156 0.19 -2.2 2,687,804 - DvMF_2156 0.20 -1.9 2,687,871 + DvMF_2156 0.22 -1.9 2,688,238 + DvMF_2156 0.33 -2.0 2,688,305 - DvMF_2156 0.35 -2.6 2,688,409 - DvMF_2156 0.38 -2.0 2,688,517 + DvMF_2156 0.41 -2.2 2,688,559 - DvMF_2156 0.42 -2.1 2,688,621 + DvMF_2156 0.44 -1.6 2,688,637 + DvMF_2156 0.45 -2.4 2,688,637 + DvMF_2156 0.45 -2.3 2,688,700 - DvMF_2156 0.47 -1.5 2,688,896 - DvMF_2156 0.52 -1.7 2,688,943 - DvMF_2156 0.54 -2.1 2,689,005 + DvMF_2156 0.56 -2.3 2,689,087 - DvMF_2156 0.58 -2.3 2,689,334 + DvMF_2156 0.66 -1.7 2,689,641 - DvMF_2156 0.75 -2.2 2,689,720 - DvMF_2156 0.77 -2.8 2,689,874 - DvMF_2156 0.82 -2.0 2,690,073 - DvMF_2156 0.88 -1.2 2,690,073 - DvMF_2156 0.88 -2.4 2,690,223 + -1.9 2,690,231 - -2.5 2,690,271 + -2.5 2,690,320 - -2.1 2,690,457 + -1.5 2,690,480 + -1.7 2,690,488 - -1.1 2,690,529 - -2.6 2,690,579 - DvMF_2157 0.10 -2.0 2,691,043 + DvMF_2157 0.53 -2.2 2,691,046 - DvMF_2157 0.54 -2.5 2,691,051 - DvMF_2157 0.54 -2.5
Or see this region's nucleotide sequence